Protein
View in Explore- Genbank accession
- XEN21701.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSPTF
- Protein sequence
-
MAYDKQVWQNAPSTETPLSAGALNHMEDGIADAHTLAESKADSEHTHVLADVTDVVATAGEVNVLAGATVSTGELNTLDGVTSNVQTQLDGKAATSHTHAASSITSGTLDIARIPLGNSGSTVCVGNDSRLSDQRTPLDGSVSSAKIASGSITNTHVSPSAAIAASKMSTGVQASLTKADGSVQKSGTAEGMWMGTTLPGTGTAGVLYVVVP
- Physico‐chemical
properties -
protein length: 212 AA molecular weight: 21244,16540 Da isoelectric point: 4,89210 aromaticity: 0,01887 hydropathy: -0,06509
Domains
Domains [InterPro]
DC_1940
STR
1–212
STR
1–212
PF12789
STR
30–58
STR
30–58
1
212
Architecture
STR 1-212
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
212
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 149 | 149 | 0,9011 |
| Central domain | 150 | 201 | 53 | 0,0452 |
| C-terminal | 202 | 212 | 10 | 0,9882 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-149
1-149
Central
150-201
150-201
C-terminal
202-212
202-212
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XEN21701.1
[NCBI]
Genbank nucleotide accession
PP978878
[NCBI]
CDS location
range 23821 -> 24459
strand +
strand +
CDS
ATGGCTTACGACAAGCAGGTGTGGCAGAACGCGCCGTCAACGGAGACGCCGTTGTCGGCGGGGGCGTTGAACCACATGGAGGACGGCATCGCCGACGCCCACACTCTCGCCGAAAGCAAGGCGGACAGTGAGCACACGCATGTGTTGGCGGATGTCACGGATGTGGTGGCGACGGCCGGTGAGGTGAATGTGCTGGCCGGTGCGACGGTTTCGACTGGCGAGCTGAACACGCTCGATGGCGTGACCTCGAACGTTCAAACCCAGTTGGATGGGAAGGCTGCCACGTCGCACACCCACGCGGCATCATCCATCACGTCCGGCACGCTGGACATTGCCCGTATCCCGCTCGGCAACTCGGGCTCGACGGTGTGTGTGGGTAACGATTCGCGCCTGTCAGATCAACGCACACCACTCGATGGTTCGGTGTCGTCAGCGAAGATTGCATCCGGGTCGATCACCAACACCCACGTCAGCCCGTCCGCGGCGATCGCGGCGTCGAAAATGTCGACTGGTGTGCAAGCATCGCTCACCAAAGCGGACGGGTCGGTGCAGAAGTCTGGGACCGCTGAGGGCATGTGGATGGGCACCACCCTTCCCGGTACTGGCACGGCTGGTGTGTTGTATGTGGTGGTGCCGTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
c9365ea2c063b422c094e99104419ec60a298ac9974183ffc27c510ff3b34b12
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50