Protein

UniProt accession

A0A0K1Y5U2 [UniProt]

Protein name

Pectate lyase superfamily protein domain-containing protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,95

TSP

Evidence GenBank

Probability 1,00

TSP

Evidence Phold

Probability 1,00

Protein sequence

MPLYTYGGNGAAVLTDAAGNVIPDYPVTVRVAGTGQPVTALYEADGTTPIGELRSNSADSDSPGAIRTFRAADITAIEYEYNGLSGPVRWFESGREVPTEALEAARGALSRAAGGTVAGPLTAAGGLTVKNGFTVDGDGHVDALAVDTLTVNGKPVTGDGGSLPGMYAPQAYGAKGDGVADDAPAVQAALDAAYNAGGGWVLVPPGTYRCATLPLRIRRGTRLTLMQGAVFRRGAPNTFLLNGDATQQFGGYTGHGDLVVEGGVWDMRATANPADPDMCISIGHARNVTIRDLEIRDVGGYHAIELNSTKNGRVIGCSFRGYLDTGGRDFSEAVQIDGAFRVSVFGGFGPYDGTPCEDVVMRDCYVGPSGTAGTVAWPAGVGSHSAAWGVWHRRIKVANNTFEGGAQYAVKPYIWDDSIISGNTVVNMGAGVWARTLDSSKAADRRDMGGVDRASSQAGSGLVVEGNTFRNIGAFNDAIFVEGEASGKWRHVTITGNTVATVGGSENGIRAVHTERFTATANTFTDIGGTALSTENCADGVLSGNHITTCGGSFFTSNGGARLTVADNNASDCKSHGFWAWSNTDLKLTGNYLRGAGRGDSTAQGIRLSTSGDRITITNNTYRKWGSGTEAASVYTCTAAPTNIRRWGNDWLGQGTVTSTAANETLSPYDAGTP

Physico‐chemical properties

protein length:	674 AA
molecular weight:	69945,38030 Da
isoelectric point:	5,32413
aromaticity:	0,08160
hydropathy:	-0,21365

Domains

Domains [InterPro]

IPR011050
170–529

IPR011050 IPR006626 IPR006626 IPR006626 IPR006626

IPR012334
170–515

IPR012334

IPR024535
172–221

IPR024535 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626

IPR011050
459–656

IPR011050

IPR039448
478–624

IPR039448

A0A0K1Y5U2

1 674

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Domains [InterPro]

InterPro ID	Start	End	Source	Name
IPR011050	170	529	InterPro	Pectin lyase fold/virulence factor
IPR012334	170	515	InterPro	Pectin lyase fold
IPR024535	172	221	InterPro	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain
IPR006626	285	308	InterPro	Parallel beta-helix repeat
IPR006626	309	338	InterPro	Parallel beta-helix repeat
IPR006626	392	413	InterPro	Parallel beta-helix repeat
IPR006626	415	436	InterPro	Parallel beta-helix repeat
IPR006626	459	483	InterPro	Parallel beta-helix repeat
IPR011050	459	656	InterPro	Pectin lyase fold/virulence factor
IPR039448	478	624	InterPro	Right handed beta helix domain
IPR006626	489	513	InterPro	Parallel beta-helix repeat
IPR006626	537	558	InterPro	Parallel beta-helix repeat
IPR006626	560	582	InterPro	Parallel beta-helix repeat
IPR006626	583	610	InterPro	Parallel beta-helix repeat
IPR006626	612	633	InterPro	Parallel beta-helix repeat

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptomyces phage SF1 [NCBI]	1690817	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Streptomyces flavovirens [NCBI]	52258	Bacteria > Actinobacteria > Actinobacteria > Streptomycetales > Streptomycetaceae > Streptomyces

Coding sequence (CDS)

No CDS data available.

Gene Ontology

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID

f2beeebcfed9569b165447afe510d7318594f42b75ab40b3bd95fd9d5e2552b3

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7799

Evidence 0,7799

Download PDB

Literature

No literature entries available.