Protein

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Genbank accession
YP_009804148.1 [GenBank]
Protein name
tail length tape-measure protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MKKILDSAREYLRTHNKIKTACLITLELPGSTGSSSAYIYLTDYFRDVIYNGILYTSGKVKSITTHKQNRKLSIGSLSFTITGTAEDEVLKLVQNGVSFLDRSISIHQAVIDEEGNILPVDPDTNGPLLYFRGKITGGGIKDNIGTSGVSTSVITWNCSNQFYDFDRVNGRFTDDADHRGLEIVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFLPVVYGVQKIPGIPVFADTELHNPNIVYVVYAFCEGEIDGFLDFYFGDVPMICIDPNDSKSRTCFGTKKVAGDTMQRIASGQPSSEPSVHGQEYKYNDGNGDIRIWTYHGKADQSAADVLVNIAKEKGFYLQNMNENGPEYWDSRYKLLDTAYAIIRFTINENRTEIPEVSAEVQGKKIKIYHSDGRVTADKTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDAVGENRQIVQMNTILDTSESVFKNVQGLIESYGGAINNLSGQYRITVEKFSNTPLEIDFLDTYGDLELSDTTGRNKFNSVQASILDPALSWKTNSITFFNSIFKEQDKGLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLTFSLPYHFIGIEPNDPIAFTYGRYGWDKKYFLVDEVENSREGKINITLQEYGEDVFINSEQVDNSGNDIPDVSNNVLPPRDFMYTPTPGGQVGSIGKNGELSWLPSLTNNVVYYSIVHSGHADPYIVQQLETNPNLRMIQEIIGEPAGLAVFEIRAVDINGRRSSPVTLSVELNSAKNLSVVSNFRVTNTASGDASEFVGPDVKLAWDRIPEEDIIDGIFYTLEIYDNLDRLLRSVRIEDQYVYDYLLIYNKADYALHNEDALGINRKLRFRIRAEGDNGEQSVDWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107195,67870 Da
isoelectric point:5,05699
aromaticity:0,11275
hydropathy:-0,40190

Domains

Domains [InterPro]
DC_0187
STR
229–948
DC_0187
IPR032876
ATT
594–686
IPR032876
YP_009804148.1
1 949
Architecture
STR
ATT
STR
STR 229-593 | ATT 594-686 | STR 687-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009804148.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9484
Central domain 313 525 214 0,3091
C-terminal 526 949 423 0,0052
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-525
C-terminal
526-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SH9
[NCBI] 		2025819 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus SH9
Host Salmonella enterica subsp. enterica serovar Hadar
[NCBI] 		149385 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009804148.1 [NCBI]
Genbank nucleotide accession
NC_047999 [NCBI]
CDS location
range 29861 -> 32710
strand +
CDS
ATGAAGAAAATTCTTGACAGTGCAAGAGAGTATTTAAGAACTCATAATAAAATAAAAACTGCATGTCTTATTACTCTTGAATTGCCTGGCTCTACTGGATCAAGTTCTGCCTACATATATCTTACAGATTATTTTAGAGACGTAATTTATAATGGTATTCTTTATACATCTGGTAAAGTTAAGTCTATAACAACGCATAAACAAAATAGAAAACTTTCCATTGGTAGCCTTTCTTTTACTATCACAGGTACTGCTGAGGATGAAGTATTAAAACTAGTCCAAAATGGTGTATCCTTCCTAGATAGATCTATTTCAATTCATCAAGCGGTTATTGATGAAGAGGGTAACATTCTTCCTGTAGATCCAGACACTAATGGTCCTTTACTTTACTTCCGTGGTAAAATTACTGGTGGTGGTATTAAGGATAACATTGGTACTTCTGGAGTTAGTACATCCGTTATTACATGGAACTGTTCAAACCAATTCTATGACTTTGATAGAGTAAATGGACGTTTCACAGATGATGCTGACCATAGAGGGCTTGAGATTGTTGCCGGCCAATTAGTTCCGTCTAATGGTGCTAAGCGACCTGAATACCAAGAAGACTACGGGTTCTTCCACGCTAACAAGAGTATCTCTATTCTTGCTAAGTATCAGGTTCAGGAAGAACGTTATAAGTTACAATCTAAGAAAAAATTATTTGGTCTTTCTAGAAGCTATAGTCTAAAGAAATATTATGAGACTGTAACTAAGGAAGTAGATCTTGATTTTAACTTAGCTGCTAAATTCCTGCCAGTAGTATATGGAGTTCAGAAAATTCCTGGAATCCCAGTATTTGCAGATACTGAACTGCATAATCCTAATATCGTATATGTAGTATACGCTTTCTGTGAGGGTGAGATTGATGGGTTCCTAGATTTTTACTTTGGTGATGTACCAATGATCTGTATTGATCCTAATGATAGTAAGTCTCGTACTTGCTTTGGTACTAAGAAAGTAGCTGGTGATACCATGCAACGTATTGCTTCTGGTCAACCAAGCTCTGAACCCTCTGTTCATGGACAGGAATATAAGTATAATGATGGTAATGGCGATATCCGTATCTGGACTTATCATGGTAAGGCCGATCAATCTGCTGCTGATGTTCTAGTTAACATTGCAAAAGAGAAAGGTTTCTATTTACAGAACATGAACGAGAATGGGCCGGAATACTGGGACTCTCGTTATAAACTGCTAGATACTGCTTATGCTATCATTCGCTTTACTATTAATGAAAACAGAACAGAAATTCCAGAAGTTAGCGCTGAAGTTCAAGGTAAGAAGATTAAGATCTATCATTCAGATGGTAGAGTAACTGCTGATAAGACTAGCTTAAATGGTATCTGGCAAACTCTGGACTACCTAACCTCTGATCGCTATGGTGCTAATATCACTATTGATCAGTTCCCTCTCCAGCAACTTATTCAAGAAGCAGCTATTCTGGATATAATTGATGAATCCTATCAGGTTTCTTGGCAACCCTACTGGAGATACGTTGGATGGACTGATGCTGTAGGAGAGAATAGACAAATAGTTCAAATGAACACTATTCTCGATACCTCTGAGTCAGTATTTAAAAACGTGCAGGGATTAATAGAGTCTTATGGGGGTGCTATCAACAACTTATCTGGTCAGTATAGAATAACTGTTGAGAAGTTCTCGAATACCCCATTAGAGATTGACTTCTTAGATACCTATGGTGATCTGGAATTGTCAGATACTACTGGTAGAAATAAATTCAACTCAGTACAAGCCTCTATACTAGATCCTGCATTAAGCTGGAAAACTAACTCCATTACATTCTTTAACTCTATATTTAAGGAACAAGATAAAGGGTTAGATAAAAAACTTCAACTTTCTTTTGCAAATATCACTAACTACTATACTGCGCGTAGCTTTGCAGATAGAGAACTGAAAAAGTCTCGTTACTCACGAACTCTCACATTCTCATTACCATATCATTTCATAGGCATTGAGCCTAACGATCCGATTGCTTTTACATACGGTCGTTATGGTTGGGACAAGAAATACTTCCTAGTTGATGAAGTTGAAAACTCTAGAGAAGGTAAGATTAATATTACACTGCAAGAGTATGGTGAGGATGTGTTCATTAACTCCGAGCAGGTTGATAATAGTGGTAACGATATCCCTGATGTTAGTAATAACGTACTGCCTCCCAGAGACTTTATGTATACACCAACACCAGGTGGACAAGTAGGGTCTATTGGTAAGAATGGTGAGCTATCTTGGCTTCCTAGCTTAACTAATAACGTTGTTTATTACTCCATCGTTCATTCTGGACATGCTGATCCTTATATCGTACAGCAACTAGAAACTAATCCAAATCTACGAATGATCCAAGAAATTATTGGAGAACCTGCTGGTTTAGCAGTCTTTGAGATTAGAGCTGTAGATATTAATGGTAGACGAAGTTCTCCTGTAACATTATCAGTAGAACTTAACTCTGCTAAAAACTTAAGCGTCGTTAGTAACTTCAGGGTTACTAATACAGCTTCAGGAGATGCTTCGGAGTTTGTAGGACCAGACGTTAAATTGGCCTGGGATAGAATTCCAGAAGAAGATATCATTGATGGAATCTTCTACACTCTCGAAATCTACGATAACCTAGATCGTTTATTAAGAAGTGTACGAATTGAAGATCAGTATGTCTACGATTATCTACTGATATACAATAAGGCAGACTATGCTCTTCATAATGAGGATGCTCTGGGTATTAATAGGAAGTTACGCTTCCGTATAAGAGCAGAAGGTGATAATGGCGAGCAATCTGTGGATTGGGCATCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d734b996cf373357d869e867e3cb67b291fc65071062403e302db7302188ad7a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8201
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage SG1 Infecting Salmonella Gallinarum Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-09-15 — GenBank