Protein

Genbank accession
YP_010037978.1 [GenBank]
Protein name
pectin lyase activity
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNLTPNPGWDDVPQLETTTKAQGGVGGPMNAQAQALVNRTEALNPDNQQTPSALDGSESWVSRKSGAWVKTPLAAIASWIIGFYRGFTLNWAGALARPVSNKLNDVVSVSDFGAIGDGSSHPLSGVASLFGMSTSGWTLAQWQTIYPHAQALTDELDWCALQAAVNSATGPFIFRCGIQKQYITNRTIVSGANDILIDLQRSRITNTAGVDCWNHGTTSSPANGVAEIVGGGLETSDYTKKCFYTYMNHGISGGGALKNSLTMRDFRGRGRVHGVNVARGIVLDNAWTSTPVGYVDMDAFTFDVSKYADSTNASSFSYFLRNVQTSGYRFALAFNLLGSPASYPSFGAYMEGVILLGCRAYNGRGLLNVTNQANTGSTNNYQSPLWQVIACDTQGWGEPILLSGLMNVRLHDNYFVIDQGSVPSGITPPSTLNAIGFSMCSEVKARGNVFNVLPNVASQVNLVASDANCDDIIFERTRIYAGAAGIVGFNIAATSSATKYRIMERGTLVLSGSCSVFGTNPQYWSSEYNARASGATMDEGGVKFLQGTFAGTTDGSGVLNLAFPANLFASAPNSMLVSNGDTGAYSGFVGYKRSTLTASGVSLQGAANTAIRFDYIVKGA
Physico‐chemical
properties
protein length:621 AA
molecular weight: 65821,88590 Da
isoelectric point:6,32308
aromaticity:0,09984
hydropathy:-0,05346

Domains

Domains [InterPro]
IPR012334
82–559
IPR012334
YP_010037978.1
1 621
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Mica
[NCBI] 		2767579 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010037978.1 [NCBI]
Genbank nucleotide accession
NC_054148 [NCBI]
CDS location
range 11067 -> 12932
strand +
CDS
ATGACGAACCTTACCCCGAATCCTGGTTGGGATGATGTGCCGCAGCTGGAAACGACGACGAAGGCGCAAGGCGGCGTCGGCGGCCCGATGAATGCTCAGGCGCAGGCGCTGGTGAACCGCACCGAGGCGCTGAACCCCGACAACCAACAGACGCCCAGCGCACTGGATGGCAGCGAGTCGTGGGTATCTAGGAAGTCGGGCGCATGGGTAAAGACGCCCCTCGCTGCGATTGCGTCCTGGATTATTGGGTTCTATCGCGGATTTACGCTCAACTGGGCTGGCGCGCTTGCGCGGCCAGTTTCGAACAAGCTGAATGACGTGGTTAGCGTCAGTGACTTTGGCGCAATCGGCGACGGCAGTTCGCACCCGCTTTCTGGTGTGGCAAGCTTGTTTGGTATGTCAACGTCCGGCTGGACGCTCGCGCAATGGCAGACCATCTACCCGCATGCGCAGGCGCTGACAGACGAACTGGATTGGTGCGCGCTGCAGGCCGCAGTGAATTCCGCTACTGGTCCGTTCATTTTTCGCTGCGGCATTCAGAAGCAATACATTACGAACCGCACCATCGTTAGCGGCGCGAATGATATCCTGATTGACCTGCAGCGCTCGCGCATTACGAATACTGCGGGCGTGGATTGCTGGAACCACGGCACCACCAGTTCGCCAGCCAATGGCGTTGCCGAAATCGTCGGCGGCGGCCTGGAAACGAGCGACTACACGAAAAAATGCTTCTACACATACATGAACCACGGAATTTCCGGCGGCGGCGCGTTGAAAAACTCGCTGACGATGCGTGATTTTCGTGGGCGCGGGCGCGTGCATGGCGTCAACGTGGCGCGCGGCATCGTCCTGGATAACGCATGGACCAGCACGCCTGTCGGCTATGTGGACATGGATGCGTTCACGTTCGACGTTTCGAAATACGCGGATTCCACTAACGCGTCGTCATTCTCGTATTTCCTGCGCAACGTTCAGACGAGCGGGTATCGTTTCGCCCTGGCGTTCAATTTGCTTGGCTCGCCTGCGTCATATCCGTCATTCGGCGCGTACATGGAAGGCGTCATCCTGCTGGGCTGTCGTGCATATAACGGCCGAGGGCTTCTGAACGTTACCAATCAGGCGAACACTGGGAGCACGAACAATTATCAGTCCCCGCTGTGGCAGGTGATTGCGTGCGATACTCAGGGATGGGGCGAACCCATTTTGCTGTCTGGCCTGATGAACGTTCGGCTGCATGACAACTATTTCGTGATTGACCAGGGGTCCGTGCCATCCGGAATTACGCCGCCCAGCACGCTGAACGCTATCGGCTTTTCGATGTGCAGCGAAGTTAAAGCGCGGGGGAATGTGTTCAACGTTCTGCCCAATGTCGCAAGCCAGGTTAATCTGGTGGCGTCCGATGCAAATTGCGACGATATCATTTTTGAGCGAACGCGTATTTATGCAGGTGCGGCGGGAATCGTCGGCTTCAATATTGCAGCCACTTCGTCGGCGACGAAGTACCGCATCATGGAGCGCGGCACCTTGGTGCTGTCGGGTAGCTGTTCTGTTTTCGGGACTAACCCGCAATATTGGTCATCGGAATATAATGCACGTGCATCCGGCGCGACGATGGACGAAGGTGGCGTGAAGTTCCTGCAGGGAACGTTCGCCGGCACGACGGATGGAAGTGGCGTTCTCAATTTGGCATTCCCCGCCAACCTGTTCGCGAGCGCTCCCAACAGCATGCTGGTGAGCAATGGCGATACCGGGGCCTATAGCGGCTTTGTTGGCTACAAGCGTTCCACGCTTACCGCTTCCGGGGTTTCGCTTCAGGGGGCTGCCAACACTGCTATCCGCTTCGATTACATTGTGAAGGGGGCTTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
90344d628b5caeaec50b6779307259f109fedaa3dbc03151bdd54142a4c598d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7735
Evidence 0,7735
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of Burkholderia cenocepacia myophage Mica Garcia,J.A., Yao,G.W., Guadalupe Vizoso-Pinto,M., Gonzalez,C., Liu,M.L. and Gill,J. 2021-02-11 — GenBank