Protein

View in Explore
Genbank accession
ASZ77946.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MALVIHYTRNEDGTFDAKRYHDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKVFSVILKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMTTYKVFNAAGKIVEYGYYDAGRGYLDIRPEDITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSTPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAVSVVKGSRMATYDGYVTAVNGLTVELSQPVKFTSGDDHSLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93896,82560 Da
isoelectric point:5,23086
aromaticity:0,09742
hydropathy:-0,37477

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
ASZ77946.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASZ77946.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,9822
Central domain 234 432 200 0,6528
C-terminal 433 852 419 0,1501
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-432
C-terminal
433-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ST3
[NCBI] 		2025820 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASZ77946.1 [NCBI]
Genbank nucleotide accession
MF001364.1 [NCBI]
CDS location
range 22018 -> 24576
strand -
CDS
TTGGCGCTAGTAATCCACTACACCCGCAACGAAGACGGCACATTTGACGCTAAACGTTATCACGATAATCCGATGAACTTCGTCGTGAACCATGTTCCGGACGGGGTTCCGGTACGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTAGAATCTGCCGGTGGGGGGGCTATTAAAGGCGTCATGAAGGTTTTTAGCGTTATCCTTAAACCGCTGGCGAAACTACTATCACCATCCGTGAAAGGGGCGTCCTCTAACCTGGCGAACTCGCAGGCGGATTCCCCGAACAACAGTCTCACCGACCGCAACAACAAGGCGCGCCCGTACGAGCGCAGTTACGACATCTGCGGGACGGTGCAAACCATCCCCAATAACCTTATGACTACTTACAAGGTGTTTAACGCCGCCGGTAAAATTGTAGAGTACGGTTATTACGACGCCGGTCGCGGCTATCTCGACATACGCCCTGAAGATATCACTGACGGGGACACCCGTGTATCGGATATAACAGGCACGTCGGTTGCCGTGTACGCGCCGTATACGTCACCCAATAACACGTCTACACCCCAGGTCATGGTCGGAGACCCGATAGAGCAGGGCTTGTATATTACCGTAGAATCTAACGAAGTCGATGGTGTGGTTCTTAAAGCACCCAACGGTCTGGGTATTTCTTTCTCTTACATGTCCGGGTATCCGTCTTTGTCCGGGAACATCGGCACGATATACGACCCAACAGGTGGTTCGGATTTTTCTGGAGTGTTGGTGCCTAATGACACGTTTTCGTTGGTGTCAGCGTGGACAAATACGGACGTCGACTTGTCCGGCGGCGGGTATCAGGTGTTAAGCGTATCCGAAGGGACCGTTACCTTTATCGTGCCTGGCGGCCTTATCGGGCGATGGCAAGAAATAAGACCCGGTTCATTTTTCCGCGGTGATGGAGAGGCCTCGCTGCAACCAGACAACACGTATGAGAAAACATTAACCGATTGGGTTTCAATAAACCGTACCGAGGTTGAGCGTATAGTCGCCAATATCGCCGCCGCGAACGGCATGTATAAAGACAACGGCAAATCGAAAACACTGGCGTCAGTCACCGCCGAAATACAGTATCAATTGCTTGATGAAAACAGCACTCCTTACGGACCGATATATACTGCGCAAGGAACTGTGTCCGGGCGTACACCGGACTACAACGGCGTCACTATTTACGCCGACCTGCCGGTTGTGTCACGGGTGCGGGTGCGCGCCAGAAGGGTAACAGACCTGGACTTTAATTTCGAGGGGTCTGTAGTTGATGAGATAACGTACGTTAACTTATACGGGCAAACACGTGACAACACCCCACACTACGGCAACAGAACAACAGTACACTCGATGCGCAAGCAGACCCCACGTGCTGCGGAAGTAAAGCAACCGCAGTTGCGTATGATTGCTACTGAAATGGTGTACAAATACCTCGGTAACGGTGTTTTCGAAGATACGATGACACCTAATACACAGGCTGTACAATCCCTCATCCGCCTGGCGCGTGACCCGGATGTTGGCGGTTTAAACCTGACAGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTTGAAGCGTATTTTGGCGACAAACAGGCTGGAGAATTTTGTTACACGTTTGATGACTATAAAACCACTATGCAGGATATAGTTAGTACTATAGCCGACGCTATCTTCTGTACTCCATATAGGCGTGGGGCGGATATCCTTCTCGATTTTGAACGCCCTCGCATGGGTCCTGAGATGGTGTTCACCCACCGAAGCAAGGCTGGTACTTCCGAAAAATGGACCAGAACCTTTAACGATGCTCAGGTGTTCGATAGTCTTAAATTCTCGTACATAGACCCTAAAACAAACGTTAAAGAAACCATAACAATACCTGAAACCGGGGGCCTTAAAACGGAGACTTATGACTCAAAAGGGATCCGCAACTATAAGCAGGCTTTCTGGGCGGCAAACCGTCGCCACCAGAAGAACATTTTAAAGAAAATTTCGGTGTCGTTTACTGCCACTGAAGAGGGTATTTTTGCCCTTCCGAATCGTGCCGTTAGTGTGGTTAAGGGTTCGCGTATGGCTACTTACGACGGCTACGTAACCGCGGTTAACGGTCTTACCGTAGAGCTATCCCAGCCGGTTAAGTTCACATCCGGAGATGACCATTCTTTGGTTCTAAAGTTACGTGATGGCGGAGTCCAAAGTGTTCGTGTCGTCCCTGGTGCACATGACCGACAAGTAATTATGACGTCGGTGCCGCAGGAAGCTATTTACACGGGTAATAGCGCCCTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCTAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7186036c4876d56fa174f0dc6113ad3f338a57c61c4d553455f6ae5b2285cf4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8283
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage ST3 Infecting Salmonella Typhimurium Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-01-15 — GenBank