Protein

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Genbank accession
UPW37237.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MPPAIIGAVVAIGAAAGAAAGIITATTALVIGIAASAAGALLTKTQSYNFDSYTPQSERKQVIRAAAASRTVIYGTTVSSGVLVFAEEEPGVQDPDKHGENYEKLTLVLALAGHELTEVGQVWLGDDPIGTYAGNASYKVYNNPTTVSQDMLNRCPSWKRDMIGKGICWMQLNLVYDSQKFPAGLPNVKCVKKGRKVLDPRTGQMVFSNNAALVILDYLRVYLKRGDDSILWEQFKEAANICDERVKNADDTFESRYTINGEFDMDEAPSKILEDMLDACGGELTYIGGKHGILVGAYYGPPELTLDTSCIAGDIKITPETAFKDRTNTITGTYIDPLQNYQEADFPSVSVSEWVQQDGQEITQDVDYRFVTSPYQAQRLANLTLKRKRIGRSIEIPCNMRGYRFRPGMYVYVDIPNIGMNKVEMRVIKWQFDPKGGVTVTVRQDFPDLWDDAIGKPVERPDLVDLPTGGAMQPQNLQYEVLQISDVVQGVLSWQNIMAVAYNNVVIKKDGTTVLTVQVPGQSTRITGLIRGAYTAHVKAVAYTGATSPEAYLEFNIQAPSAPTSVEVTQGYFAVTLKPKSADLANVSTQYDFWTSGETRLPSAAVDVVERQATRAGMGTTWTSEGLLNDRTYYWYVRAINAFGSSSFVEVAARCFTDAAGLIPQIDTEFKGTNTYKELMAEIGSVSDGVKSYVDDQIETSEGRLTQTIDTVQQSVVLVDGKVQQQGVTINEQGQLIDAQGKLIETNGQQINVVKATVQEVSKSVVDLEGNVNAQWGAKIQVDSKGQKYVAGIQLGMEGSGGAIQSYFMVNANNFAIYNPTNSTADLAFAVKNGQVFMKATFIENGSIDNAKIGNYIQSNNYVAGSAGWKLNKAGDAELNNVVVRGTVYATNGRFTGEIQATSGTFKGTVEASRFIGDVVAIYTFPDILGIGADISGEQYKVYTYNDSSSSPQARSVVFDCVVRTSGTSAGYKLKLTLAGQYREYIINQTNIMIPIKFGVSGVTTRSIQLILDTDRGTGTHIDIIAPTLTIGRASGTFTVSG
Physico‐chemical
properties
protein length:1042 AA
molecular weight: 113062,19600 Da
isoelectric point:5,07535
aromaticity:0,08733
hydropathy:-0,16056

Domains

Domains [InterPro]
DC_0754
STR
1–1028
DC_0754
IPR032876
ATT
315–419
IPR032876 IPR013783 IPR053171
IPR057587
ATT
562–666
IPR057587 IPR015406
UPW37237.1
1 1042
Architecture
STR
ATT
STR
ATT
STR
STR 1-314 | ATT 315-419 | STR 420-561 | ATT 562-666 | STR 667-1028 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW37237.1
1 1042
Domain Start End Length (AA) Confidence
N-terminal 1 21 21 0,9112
Central domain 22 220 200 0,1000
C-terminal 221 1042 821 0,2203
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-21
Central
22-220
C-terminal
221-1042

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_ESCO3
[NCBI] 		2918878 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW37237.1 [NCBI]
Genbank nucleotide accession
OM386652.1 [NCBI]
CDS location
range 50826 -> 53954
strand +
CDS
ATGCCACCAGCAATAATTGGAGCTGTAGTTGCTATCGGGGCGGCGGCTGGGGCAGCGGCAGGTATTATCACAGCCACTACCGCGCTTGTAATTGGTATTGCTGCCAGTGCTGCTGGAGCTCTACTTACAAAAACTCAGAGCTATAACTTTGACTCCTATACACCTCAGAGCGAGCGTAAACAGGTTATTCGTGCTGCTGCTGCATCCAGGACAGTTATTTATGGGACGACTGTGTCTAGTGGTGTTCTTGTATTTGCAGAAGAAGAACCGGGAGTACAGGATCCAGATAAACACGGTGAGAACTACGAGAAGTTGACTCTTGTATTGGCATTAGCTGGACACGAACTGACTGAAGTAGGACAAGTGTGGTTAGGGGACGATCCAATAGGTACTTATGCGGGAAACGCGTCCTATAAGGTATACAACAATCCTACTACGGTCAGTCAAGACATGTTGAATCGCTGCCCATCATGGAAAAGGGACATGATTGGTAAAGGTATCTGCTGGATGCAGTTAAACCTAGTATATGATTCGCAGAAGTTTCCAGCTGGACTTCCTAATGTCAAATGTGTTAAGAAGGGGAGAAAAGTTCTAGACCCTAGAACTGGACAGATGGTGTTTAGCAATAATGCCGCCCTTGTGATTTTGGACTATCTTCGAGTGTATCTTAAACGCGGAGACGATTCAATTCTTTGGGAACAGTTCAAAGAGGCCGCTAACATATGTGATGAAAGAGTTAAGAACGCGGATGACACGTTTGAATCCCGGTATACTATCAACGGGGAATTTGACATGGATGAAGCACCTTCTAAGATCCTGGAAGACATGCTTGACGCTTGCGGTGGGGAGTTGACTTATATCGGCGGTAAGCATGGTATCCTGGTAGGTGCATATTACGGGCCTCCGGAATTAACTCTGGATACAAGCTGCATTGCCGGTGACATTAAAATCACACCAGAGACAGCTTTTAAAGATCGAACTAATACAATCACAGGTACTTACATCGATCCTCTGCAAAACTATCAAGAAGCAGACTTCCCGTCTGTAAGTGTTTCTGAATGGGTACAGCAAGACGGTCAAGAGATTACACAAGACGTCGATTATCGTTTTGTCACAAGCCCATATCAGGCTCAACGTCTAGCTAACTTGACGTTGAAACGCAAACGTATCGGTCGTTCCATCGAGATACCATGTAACATGCGTGGGTATCGTTTCCGTCCAGGTATGTATGTTTACGTTGACATTCCTAATATTGGAATGAACAAGGTAGAGATGCGTGTTATTAAGTGGCAGTTTGATCCGAAAGGTGGTGTCACTGTAACTGTACGCCAAGACTTCCCGGACTTATGGGACGATGCAATTGGCAAACCTGTAGAGCGACCAGATCTAGTGGATTTGCCTACTGGTGGCGCTATGCAACCTCAGAACCTACAATATGAAGTCTTACAAATTAGCGACGTTGTACAGGGTGTTCTGTCGTGGCAAAATATAATGGCTGTAGCCTACAACAACGTAGTAATTAAGAAAGATGGTACTACCGTATTGACGGTGCAAGTACCGGGCCAGAGCACGCGGATTACGGGGCTTATTCGCGGCGCTTATACAGCACATGTGAAAGCTGTGGCGTATACCGGCGCGACAAGTCCAGAAGCGTATCTTGAATTCAATATTCAAGCACCTTCCGCCCCTACGTCTGTTGAAGTAACGCAAGGCTACTTCGCAGTGACATTGAAACCAAAATCTGCGGATCTGGCGAACGTTAGTACACAATATGATTTCTGGACTTCCGGTGAAACAAGATTACCATCCGCCGCTGTAGACGTGGTAGAACGACAAGCCACCCGTGCTGGTATGGGTACAACGTGGACTTCAGAAGGGTTGCTTAATGACCGCACTTATTACTGGTACGTGCGAGCAATCAATGCTTTTGGTTCTTCTTCATTTGTAGAGGTGGCTGCAAGATGCTTTACAGATGCTGCTGGCCTCATTCCGCAGATTGACACAGAGTTCAAAGGTACTAACACCTATAAAGAACTTATGGCTGAGATTGGAAGCGTCAGCGATGGTGTCAAGAGTTATGTGGACGACCAAATTGAAACCTCTGAAGGGCGCTTAACTCAAACAATAGATACAGTGCAACAATCTGTAGTTCTTGTCGACGGTAAAGTGCAACAACAAGGCGTCACAATCAATGAACAGGGGCAGTTAATAGATGCTCAAGGTAAGTTAATTGAGACAAACGGCCAACAGATCAATGTGGTCAAAGCTACCGTACAGGAAGTCAGTAAGTCCGTTGTGGATCTTGAAGGTAACGTCAACGCTCAGTGGGGCGCGAAGATTCAGGTGGATAGTAAAGGTCAAAAATACGTTGCCGGTATTCAGTTAGGTATGGAAGGTTCCGGTGGAGCTATTCAATCCTACTTTATGGTCAATGCCAACAACTTTGCTATCTATAACCCAACTAACAGCACAGCGGATTTAGCATTTGCAGTTAAGAACGGTCAAGTGTTCATGAAGGCAACGTTCATTGAGAACGGGTCCATTGATAATGCTAAGATCGGTAACTATATTCAATCTAACAACTATGTAGCTGGTTCTGCAGGCTGGAAGTTGAATAAAGCTGGGGATGCTGAACTGAATAATGTTGTCGTGAGGGGTACGGTATATGCCACAAACGGTAGATTCACAGGCGAGATACAGGCAACTAGTGGGACATTTAAAGGTACAGTTGAAGCAAGCAGATTTATCGGGGATGTAGTCGCAATCTATACTTTCCCAGATATATTAGGTATAGGTGCGGATATTTCCGGTGAGCAATATAAAGTATACACTTATAATGATTCGTCATCATCCCCACAAGCAAGATCTGTTGTATTTGATTGTGTAGTGAGAACTTCAGGAACTTCAGCTGGATATAAATTAAAACTAACATTAGCAGGTCAATATAGGGAATATATAATCAATCAAACTAATATTATGATTCCTATAAAATTCGGAGTAAGTGGAGTTACAACACGTAGTATACAACTGATTCTGGATACAGATAGGGGTACTGGTACACACATAGATATTATAGCACCGACATTAACAATAGGGAGAGCTAGTGGTACTTTCACTGTAAGTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bafb2b24755f14c2e958704eb302700870843e8b9ef29d2729f51aeab66a7c96
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7352
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank