Protein

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Genbank accession
YP_008125562.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNQGFLGQSKPAGATNTLLYSAPANRSASTVLNVANDGTGSAYSVGVKRYDQELTVDASTYLLHEGDLVTGYTVTVDTPFEPISAGFSSGLQLTSVDAEKKFKFESSIRPEFVEYFVKSISIRQVALESVTGDAFSIGDTITKGTAPADTTAVIYGINGNTIYIGPSTFSTGAEFAEGDTISTAGGSGGTISTGGLFAAANKFVFSTTVSGIYDLYLTAAGNSLSLFNDRPYRFDVSDSSMTGHLFQLSTTTNGEWGPDGLSPSDPSDTGDGGTENTAGKTTSGTAGSSSAYVQYDFTLDTSGNSLFYWYNGDLTTATNNTYGSESGYLTNTATPTFTQFFVYDVEGTWVNATDAFLVGGTTYTVTAQDAGPYGYVRSYSGTTLQVIKGLYSADFAGTDTFLDAPLNSTADRSTVTVSSVDVATTALQAGEYIIEGKTNAANAVDRTTSLVIGPGERVIVNSATGDNTFSLIGFEDISTALTTRRFGV
Physico‐chemical
properties
protein length:489 AA
molecular weight: 51098,01860 Da
isoelectric point:4,19764
aromaticity:0,11043
hydropathy:-0,11513

Domains

Domains [InterPro]
DC_0373
STR
1–489
DC_0373
YP_008125562.1
1 489
Architecture
STR
STR 1-489
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Uroviricota > Caudoviricetes > Pantevenvirales > Neritesvirus > Neritesvirus scam8
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008125562.1 [NCBI]
Genbank nucleotide accession
NC_021530.1 [NCBI]
CDS location
range 21404 -> 22873
strand +
CDS
ATGTCTAATCAAGGATTTTTAGGACAATCTAAACCAGCAGGTGCAACTAACACTTTGTTGTATTCTGCACCCGCTAACAGATCTGCAAGCACAGTATTGAATGTTGCTAATGATGGCACAGGATCTGCTTATAGTGTCGGTGTTAAGAGGTACGATCAAGAGCTGACGGTTGATGCCAGCACGTATCTTTTACATGAAGGTGATCTAGTTACAGGATATACTGTTACTGTTGATACTCCATTTGAACCTATTAGTGCAGGATTTAGTTCTGGATTGCAACTTACTAGCGTTGATGCTGAGAAAAAATTTAAGTTTGAATCTTCTATTAGACCAGAATTTGTTGAGTATTTTGTTAAAAGTATTTCAATTCGTCAGGTAGCACTTGAAAGTGTAACTGGTGACGCTTTCAGTATTGGTGATACAATTACTAAAGGTACTGCACCTGCAGATACAACCGCAGTTATTTACGGTATAAATGGTAATACGATTTATATCGGTCCCTCCACCTTTTCTACTGGTGCTGAATTTGCAGAAGGTGACACAATTAGCACTGCTGGTGGATCTGGTGGTACTATTTCTACTGGTGGTTTATTTGCTGCAGCAAACAAGTTTGTTTTTTCTACTACAGTTAGTGGCATTTATGATTTATATCTGACTGCTGCAGGTAATAGTCTGTCACTTTTTAACGATCGTCCATATAGATTTGATGTTTCTGATTCCTCTATGACAGGACATCTTTTCCAACTTTCAACAACTACTAATGGCGAGTGGGGTCCTGATGGTTTATCACCTTCTGATCCAAGTGATACTGGTGATGGTGGTACAGAAAACACCGCAGGTAAAACTACTTCTGGCACAGCAGGTTCTTCTAGTGCATATGTTCAATATGATTTCACTTTAGATACATCTGGCAACAGTCTTTTCTATTGGTATAATGGAGATTTAACAACTGCTACTAACAATACTTATGGTAGTGAGTCTGGTTACCTGACAAACACTGCTACACCTACCTTTACTCAGTTCTTTGTTTATGATGTAGAAGGAACTTGGGTAAATGCTACGGATGCTTTCCTAGTTGGTGGCACAACCTATACCGTAACTGCACAAGATGCTGGTCCTTACGGTTATGTTCGTAGTTACAGCGGCACTACCCTTCAAGTAATTAAAGGTTTATACTCGGCAGACTTTGCTGGTACTGACACTTTCCTTGATGCTCCTTTAAATAGTACTGCAGATAGATCTACTGTTACTGTAAGTTCTGTTGATGTTGCTACAACTGCATTGCAGGCAGGTGAATATATCATTGAAGGTAAAACTAATGCAGCAAATGCTGTAGATAGAACTACATCTCTCGTTATTGGTCCTGGGGAAAGAGTTATTGTTAATAGTGCTACTGGTGATAATACCTTCAGTCTCATTGGATTTGAGGATATCTCAACCGCCCTCACAACTAGACGTTTTGGCGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9c2f7658e25013be4a00bc10488d0f217f7cb87088de9f1934c649d5c106332
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM8 0608BI06 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank