Protein

Genbank accession
AFI55453.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MNNHILRPVYTGVAVADIEYGSNVLHVKPLESNPSATGEIDTSLELLKVEVETPKGTVESKAIFTDYLTCSWLNRNTNRITAPDVRKGERIQIWQNADSEDFYWETIGIDNHLRTQEHVIFAFSNTNNEDRANKKLDFTNCYIFEFDTVNKKIRIKTNKNDGEPFEYEIVLNTKDGFHKMSDDVGNYTLMDSLNTVIEFMNKDKTQYRMDKKDILEKCDGNRTVIVGGDNTVEITGHDKLTVKKSSTREITDNEFTKAKGIGMEVAESIVSKTGSSFDVDSPVSNFTGAVNASSLAIAPGVSVGAPPRGEGGGYTATVDGTMFVSTSLTTPELNSDILTVGEITGDKAAFSVECTAPNI
Physico‐chemical
properties
protein length:359 AA
molecular weight: 39556,66000 Da
isoelectric point:4,85038
aromaticity:0,07521
hydropathy:-0,43343

Domains

Domains [InterPro]
SSF69349
213–288
SSF69349
AFI55453.1
1 359
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Halocynthia phage JM-2012
[NCBI] 		1173297 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Halocynthia roretzi
[NCBI] 		7729 Eukaryota > Metazoa > Chordata > Tunicata > Ascidiacea > Stolidobranchia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFI55453.1 [NCBI]
Genbank nucleotide accession
JQ340088 [NCBI]
CDS location
range 161929 -> 163008
strand -
CDS
ATGAATAATCATATTTTAAGACCGGTATATACTGGGGTTGCGGTAGCAGATATAGAGTACGGTTCTAATGTATTACACGTTAAACCATTAGAGTCTAATCCAAGTGCCACGGGTGAAATTGACACATCCTTAGAATTACTAAAAGTGGAAGTGGAAACACCTAAGGGTACAGTGGAGAGTAAAGCTATATTTACAGATTACCTTACCTGTAGTTGGCTGAATAGAAATACTAATCGAATTACAGCACCTGATGTACGAAAAGGCGAAAGAATTCAGATATGGCAAAATGCGGATAGTGAGGACTTTTATTGGGAAACTATCGGTATAGATAATCATCTAAGAACTCAAGAACATGTTATCTTTGCATTTAGTAATACTAACAACGAAGATAGAGCTAATAAGAAATTAGACTTTACAAATTGTTATATATTTGAATTTGATACCGTTAATAAGAAGATACGTATAAAGACTAATAAGAATGACGGTGAACCATTTGAATATGAAATAGTATTAAATACTAAAGATGGTTTCCATAAGATGAGTGATGATGTAGGTAACTATACATTGATGGATAGTCTTAATACTGTTATTGAATTTATGAATAAAGATAAAACTCAATACCGTATGGATAAGAAGGATATACTTGAAAAGTGTGATGGTAATAGAACTGTTATTGTAGGCGGAGATAATACCGTTGAGATTACAGGTCATGATAAGTTAACTGTTAAGAAATCTAGTACTAGAGAAATAACAGATAATGAATTTACCAAGGCCAAAGGTATAGGTATGGAAGTGGCTGAAAGTATAGTTTCTAAAACTGGTAGTAGTTTTGACGTCGATAGTCCAGTAAGTAACTTCACAGGAGCAGTTAATGCTAGTAGTTTAGCAATTGCTCCTGGAGTCTCAGTTGGTGCTCCTCCAAGAGGAGAAGGTGGCGGTTATACAGCTACAGTAGATGGGACTATGTTCGTTAGTACATCATTAACTACACCAGAATTAAATTCTGATATATTAACTGTCGGTGAGATAACTGGTGATAAAGCAGCATTTAGTGTAGAGTGTACAGCGCCAAATATTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b33d4d41f733f66d93c5cda3d831f4f56f76bee4861accb3649dcef68c7faae6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6889
Evidence 0,6889
Download PDB

Literature

Title Authors Date PMID Source
Bacteriophage from diseased seasquirt, Halocynthia roretzi, showing soft tunic syndrome Mun,J.Y., Jang,H.N., Ha,M.A., Nho,S.W., Cha,I.S., Park,S.B., del Castillo,C.S., Jung,C.Y., Kim,Y.K., Kim,Y.R., Aoki,T.T. and Jung,T.S. 2012 — GenBank