Protein

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Genbank accession
GENB_fbcbf06bad3c [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYFSVGVDLGGYKVIYDKESQRAYSLPAGITSGTTAISLSTAAVLVHSAGSIDLGALAVTREEYVTLPGSFDSGSTLNVKNELLTYTDGKYRWDGALPKTVAPGSTPASTGEVGIGAWLSVGDAALRSELAASGDKIVASSFGGTVFSDYAKTITTRRLDFSTGGVVSSQFDLVLYSDGSWYKYVGSSPFPVVVAPGSSPDSNWTSQGNGQVAYGVYVSVDMFITPSMESAGDHTAAIQVALNSGARHVTFPARTLYWDGTPLIVKTGTTINAYGCTLKLKPGNYPGISTGITNRKNYSYGAGTPEHYDITVNGLVIDGNKANVTWDSTADTSTFNGFWFHQATRIKLTDCSVINAYGSRGGQPGIMFKFCTDVQVTRCHTYDTDRNGIAFYSTANFKVIGGTYQLSRWREPILMTSEDNPDGSPVLQPTSGVVLGAYCNNIGSIKGPYGMRVSGSYDVYVGGGTRIYAQNSVETPDDPSTRIGTQGFIISMFPSNSPFTRRITIDGVYINGANTDINVENTGVIDAKILNVTSENVQNALSINTTNGENTFGVVKVENYTCTLTGVKTAPRIKNINEFVGCNIDIRNPATAFTIDNYGKFTIDNLRIDTLTASSNAMNVINPKTTASDWVSSISNYHGVNNVNNIINLDGKAYIATNMGLATTTGTGIPCMEFGSKFYLFKNASNQLVRKFGSPPTSLTDGTVIG
Physico‐chemical
properties
protein length:739 AA
molecular weight: 78747,08450 Da
isoelectric point:6,27829
aromaticity:0,09743
hydropathy:-0,14087

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 G3DSA:2.10.10.80 IPR012334 IPR006626
DC_1953
STR
1–200
DC_1953 G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
91–156
IPR040775 IPR006626 IPR006626 IPR006626
GENB_fbcbf06bad3c
1 739
Architecture
ATT
STR
ATT
STR
ATT 1-166 | STR 167-186 | ATT 187-255 | STR 262-506 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_fbcbf06bad3c
1 739
Domain Start End Length (AA) Confidence
N-terminal 1 261 261 0,9948
Central domain 262 695 435 0,9844
C-terminal 696 739 43 0,9082
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-261
Central
262-695
C-terminal
696-739

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Se-B
[NCBI] 		2700089 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
03bd9a8c4813a4a4c84aa3668f11a692cd8cd695d986226f73da0389105b703d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7648
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50