Protein

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Genbank accession
XAN60319.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANKPTQPVFPLGLAAEEQSTLAGILNTGTIEHGPDAVLTLPEGNTSAGLPSSVRYNADSDEFEGFYENGGWLPLGGGGIRWEVLPHASTTTLTEGRGYLINNTTGASTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWIITSGVGLGQGRVYSREIFTKILASETSSVALNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPANTELQVIEYTPIQLGNGGGSSSSTITWVYNGGSAIGGETEITLDVVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELEPEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVVYFSVGAALSGYKVIYDKETQRAYPLPADIVPGTTAVSLSSSAVLVHSAGSVDLGELAVSREEYVTLSGSFDTGVTVNTKNELVVFTDGKYRWDGALPKEVSAGSTPSTTGGEGSGAWISVGDTSLRSDLASNSGASIIGNKNKGDGTVSRTIAEQLEQLKTILDYGAVCDGITDDSAAIEAMANDLKYVILPDYTTTYIATSITLPLGIGEFKARIKASLRIADGAKIFFTSPSTSTTQSVNLVYNQPWVSSSVDLTGKYLEITNGKTDYVMAAETATANTIDIMSLSKDDANFGTLRSCLFKVIKYDSINSRAYLDITPNFSAPGATAIVYSEVNHAHFRNIHFIDENTGTADTDGVLRFRRNYGGGISNCTGRLNYPEISYFSNFNKVENNTLDIGYTFMLSWNCYHNSFSNNSFVTPEVIKDAVLIVFKNCCRNVFTGNVINGEATSGYHWGLIFHTHCDYNVATGNKVNARHGIGDYAFNKGNIISNNNIECYSLTNLGVIFNQFTDNTIRLSAGIENTVSYTVDLRRNKFYYVGGAGTPSSGCVNLYDTGSKPFGWAGFVSAPTQRIYLDDCEFYYNESRAAIDYTSLVDFTKTADLYLPSTVTALINGGVAGVFGYVQGTRSVSIKNCKFRNIHLGVMVACVTISTNFRLDIESNVFNDVDCAYLVKSTSINNNTRGLESINDTFVSCTIACMSSNYPAYLKGAILKGVGSVLVQCGAVANIYTGIIDKSCVAPNTGSVSGVSIWYNFLNAKPSAPNYSGALTASAVHPLSYRVPYGAEYYQLNADMGVTHTVYFVNRSTPSRSKTVAISISETSYT
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 127022,25850 Da
isoelectric point:4,89971
aromaticity:0,09890
hydropathy:-0,07405

Domains

Domains [InterPro]
DC_1064
ATT
4–188
DC_1064 G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
417–482
IPR040775 DC_1082
DC_1528
STR
521–1182
DC_1528
IPR012334
STR
522–886
IPR012334
XAN60319.1
1 1183
Architecture
ATT
ATT
STR
ATT 4-188 | ATT 335-528 | STR 529-1182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAN60319.1
1 1183
Domain Start End Length (AA) Confidence
N-terminal 1 535 535 0,9960
Central domain 536 1079 545 0,9911
C-terminal 1080 1183 103 0,9116
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-535
Central
536-1079
C-terminal
1080-1183

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LHE287
[NCBI] 		3144838 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAN60319.1 [NCBI]
Genbank nucleotide accession
PP761450.1 [NCBI]
CDS location
range 139345 -> 142896
strand -
CDS
ATGGCTAATAAACCAACACAGCCTGTTTTCCCTCTCGGTCTGGCGGCTGAAGAGCAGTCTACTTTGGCTGGTATCCTCAACACGGGTACGATTGAGCATGGACCAGATGCTGTCCTGACTTTACCCGAGGGTAATACCAGCGCAGGACTCCCGTCTTCCGTTCGCTACAATGCCGACTCCGACGAATTTGAGGGCTTCTATGAAAATGGTGGATGGTTGCCGCTGGGTGGCGGTGGTATCCGCTGGGAAGTCCTTCCGCATGCCTCTACGACAACGCTCACTGAAGGGCGAGGCTATCTCATTAATAATACCACAGGGGCATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGCTCCACTGAAGACATGGCTATAACAACCGATAATGTATCAGCAACGTTCACTTGGTCTGGGCCTGAACAAGGTTGGATTATTACATCCGGCGTCGGTCTTGGCCAAGGTCGTGTCTACAGTCGTGAAATCTTTACAAAAATTTTGGCTTCTGAAACAAGTTCTGTCGCTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGATGGGAAACGTCTTGCGGAATCTAAATATTCACTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCTAACACAGAACTTCAGGTGATTGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTAGTTCTTCTACGATTACTTGGGTCTATAATGGGGGTTCAGCGATTGGTGGTGAAACCGAAATCACGTTGGACGTCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGATTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGAACCGGAGGATGAAGTTGTTGTAATTATCAATGGAACACCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTTGCTCGTGTGACCAATGTTAAAGATACAGAGGTCGTTTATTTTAGTGTTGGTGCTGCGTTAAGTGGGTATAAAGTTATTTATGACAAGGAGACGCAAAGGGCTTATCCCTTGCCTGCTGATATTGTCCCTGGTACTACTGCTGTCAGTCTTAGTTCTTCCGCTGTACTTGTACATTCAGCGGGTTCTGTAGATCTCGGGGAATTGGCTGTATCTCGTGAAGAGTACGTCACATTGTCCGGGTCATTTGATACCGGTGTAACAGTTAATACCAAGAATGAACTGGTTGTCTTTACTGATGGCAAGTACCGTTGGGATGGTGCATTACCTAAAGAAGTTTCTGCTGGTTCAACCCCTTCGACAACTGGTGGGGAAGGTTCGGGCGCGTGGATTAGTGTTGGGGATACTTCCTTAAGAAGCGATCTGGCTTCGAACTCTGGAGCTAGTATCATAGGAAACAAAAATAAAGGGGATGGAACAGTTAGCAGGACTATTGCTGAGCAGTTAGAGCAATTGAAAACCATACTTGATTACGGAGCGGTTTGCGACGGCATCACTGACGATTCCGCAGCTATCGAGGCTATGGCTAACGACCTTAAATATGTCATCCTGCCGGACTATACTACGACATACATTGCCACTAGCATAACCCTACCTCTTGGTATTGGAGAATTCAAAGCAAGGATAAAAGCATCTCTTAGAATAGCTGATGGTGCAAAAATATTCTTTACAAGCCCATCCACTTCCACCACACAGAGTGTAAATTTAGTTTACAACCAACCGTGGGTTAGTTCTTCTGTGGACCTGACAGGGAAATACCTGGAAATCACCAACGGTAAAACTGACTATGTTATGGCCGCAGAAACTGCTACGGCAAACACCATAGATATAATGTCGCTATCAAAGGATGACGCCAATTTTGGAACGCTTCGCTCCTGCCTGTTCAAGGTGATTAAATATGACAGCATAAATAGTCGTGCGTATCTCGATATAACGCCCAACTTTTCTGCTCCTGGAGCTACCGCTATTGTGTACTCCGAGGTAAACCACGCACACTTTAGAAATATCCATTTTATAGATGAAAATACTGGTACGGCAGATACCGACGGCGTTTTACGATTCCGTAGGAACTATGGAGGTGGTATTTCTAACTGCACTGGTCGTTTAAATTATCCAGAGATTAGTTACTTCTCTAACTTTAACAAGGTTGAGAATAACACGCTGGATATTGGGTACACCTTCATGTTGTCCTGGAACTGTTATCATAACTCCTTCTCTAATAACAGCTTTGTTACTCCAGAGGTAATTAAAGATGCAGTGCTAATCGTCTTTAAGAACTGCTGCCGTAACGTATTTACTGGTAATGTAATCAATGGAGAAGCTACTTCAGGATATCACTGGGGGCTTATCTTCCACACTCATTGTGATTACAACGTGGCTACCGGTAACAAAGTAAATGCCCGACATGGTATTGGGGACTACGCTTTTAACAAAGGTAATATTATCTCCAATAACAACATAGAGTGTTACAGTTTGACGAATCTGGGGGTTATTTTTAACCAATTTACTGACAACACTATTAGATTATCTGCCGGGATAGAGAATACGGTAAGCTACACAGTAGACCTACGCAGGAATAAGTTTTACTACGTAGGGGGTGCTGGCACTCCTTCGTCTGGTTGTGTTAATTTATATGATACAGGTTCCAAACCGTTCGGTTGGGCTGGTTTCGTGTCCGCCCCGACGCAAAGAATTTATCTTGATGACTGTGAGTTCTACTATAACGAGAGCAGGGCCGCTATTGATTATACTTCTTTAGTAGATTTCACAAAAACAGCGGACCTGTACCTCCCTAGTACAGTAACCGCGCTAATAAACGGGGGTGTTGCTGGAGTTTTTGGTTACGTACAGGGTACACGTAGTGTAAGCATTAAAAATTGTAAATTCAGAAACATTCATTTAGGGGTTATGGTTGCATGTGTGACTATATCTACAAACTTTAGATTAGATATTGAGTCAAATGTGTTCAACGATGTGGACTGCGCCTATCTCGTCAAGTCTACGTCTATAAACAATAACACCCGTGGCTTAGAGTCAATAAATGATACTTTTGTGTCTTGCACGATTGCGTGCATGTCAAGTAACTATCCAGCGTACCTTAAAGGAGCCATCCTTAAAGGCGTTGGTTCTGTTCTTGTTCAATGCGGCGCGGTTGCCAACATCTACACTGGCATCATAGACAAGAGTTGCGTAGCGCCCAATACCGGTTCTGTATCCGGAGTGTCCATATGGTATAACTTCCTGAACGCAAAACCGTCCGCACCCAATTACTCAGGCGCATTAACAGCTTCTGCTGTGCACCCTCTGAGTTACAGAGTACCTTATGGGGCTGAGTACTACCAACTAAATGCGGATATGGGGGTAACACACACCGTGTATTTTGTAAACAGAAGCACACCATCGCGGTCTAAAACAGTGGCGATATCCATATCAGAGACATCTTATACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9c7356281dc39b6bf451f5dddc727ef306511dc6fcd99dc1f1e59b690d5dcec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6203
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Escherichia coli phage LHE287 Xu,S. 2017-10-19 — GenBank