Protein

View in Explore
Genbank accession
YP_009204367.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MALKIRTVMTYPLNGSTVDFGITFEYLARKFVSVTLIGKDRKELVLNQDFRFTTKTQITTTRAWSPSDGYTMIEIRRYTSVTDRLVDFADGSILRAYDLNIAQIQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNLANAVEDGDAINLGQVKGWNESAWNSKNEAATSANWSARWAQGEGVIADGRYSSRQYNEWAMAIQKDVERMRGLVAADAKWADESVNKAKNSENAAAASATAASGDARWANESAQKAKTSETNAKASEERAILEANKLENNNALAASIRGITGNDVKWKGSHQFTNGVSIVRADNLEHVWRQGLWAEGNALHSDFVTELPGGEFGSGAFTHMHFVYPVSGVPTLDMYPHTTFNSKVVTKSMIDSQANFSGAHSDQYNDYAPLWQQVRASSGNEFFPLIKQRSYQAGADARSWTMGILLDNNRIAQWNLLTTNEGGVANASYTWTRDGDFNAPRQVVSGSFRTHGGSVLGGDGNITGSAFGPQNNIADWIRANFPGDIWLANPEWYPHNGSYQELTVGSGHVCTGIVLNTGGVCSGMQHRGMWIGYHNGAQRQVASIG
Physico‐chemical
properties
protein length:575 AA
molecular weight: 62912,85600 Da
isoelectric point:6,03610
aromaticity:0,09391
hydropathy:-0,44626

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0657
STR
1–574
DC_0657
YP_009204367.1
1 575
Architecture
ATT
STR
ATT 1-131 | STR 132-574 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage P694
[NCBI] 		1572754 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009204367.1 [NCBI]
Genbank nucleotide accession
NC_028863.1 [NCBI]
CDS location
range 38693 -> 40420
strand +
CDS
ATGGCTCTTAAAATTCGTACCGTAATGACTTACCCGCTGAATGGCTCTACTGTGGACTTCGGTATCACGTTTGAGTATCTAGCGCGTAAGTTCGTTTCGGTGACTCTTATTGGTAAAGACCGCAAAGAGTTGGTCTTGAATCAGGACTTCCGGTTTACCACTAAGACTCAAATCACAACCACTCGTGCGTGGAGTCCATCTGATGGATACACCATGATTGAGATTCGTCGTTACACCTCCGTTACCGACCGTCTGGTGGACTTTGCTGATGGTTCTATCCTCCGTGCTTATGACCTGAACATTGCTCAAATCCAGACACTTCACGTTGCTGAAGAGGCTCGTGATTTAACAGCGGATACGATTGGCGTTAACAACGATGGGAACCTAGATGCGCGTGGTCGCCGCATTGTGAACCTAGCGAATGCTGTAGAGGATGGTGATGCTATCAATCTTGGTCAGGTAAAGGGCTGGAATGAATCAGCATGGAACTCTAAGAATGAAGCGGCAACATCTGCCAACTGGTCTGCTCGCTGGGCGCAAGGTGAAGGTGTCATCGCTGATGGTCGCTACTCTTCCCGCCAATACAACGAATGGGCGATGGCTATTCAGAAGGATGTAGAGCGTATGCGTGGCCTTGTGGCTGCTGACGCTAAGTGGGCAGATGAGTCTGTCAACAAGGCAAAGAACTCCGAGAACGCTGCTGCCGCGTCTGCTACTGCTGCTTCTGGTGATGCTCGCTGGGCTAACGAATCGGCACAGAAGGCAAAGACATCTGAGACCAACGCGAAGGCTTCCGAAGAAAGGGCAATCCTTGAGGCGAACAAGCTGGAGAACAACAATGCACTAGCGGCCTCTATCCGTGGAATCACTGGTAACGACGTTAAGTGGAAGGGTTCTCACCAGTTTACTAACGGTGTCTCTATTGTTCGTGCTGACAACTTAGAGCACGTTTGGCGGCAGGGCTTATGGGCTGAAGGTAATGCGCTTCACTCCGACTTTGTTACCGAGCTTCCGGGTGGAGAGTTTGGTTCTGGTGCTTTCACTCATATGCACTTCGTATATCCAGTATCAGGGGTTCCTACTCTTGACATGTACCCACACACAACGTTCAACTCCAAGGTCGTAACAAAGTCGATGATTGATTCACAGGCTAACTTCTCTGGTGCGCACTCTGACCAGTACAACGACTATGCCCCACTGTGGCAACAGGTTCGTGCTTCGAGTGGTAATGAGTTCTTCCCGTTAATCAAACAGCGTTCCTATCAGGCTGGGGCTGATGCTCGCTCTTGGACTATGGGTATTCTATTGGATAACAACAGAATCGCGCAGTGGAACCTACTGACGACTAACGAGGGAGGTGTTGCAAATGCGTCCTATACGTGGACTCGTGATGGGGACTTTAATGCTCCTCGTCAGGTAGTCTCTGGCTCTTTCAGAACACATGGTGGTAGTGTATTAGGTGGCGATGGTAACATCACAGGCAGTGCATTCGGGCCTCAGAACAACATTGCGGATTGGATTCGTGCCAACTTCCCCGGTGACATCTGGCTCGCCAACCCTGAGTGGTATCCCCACAATGGTAGCTATCAAGAACTTACTGTAGGCTCCGGTCACGTATGTACTGGTATCGTTCTGAACACTGGTGGCGTGTGCTCTGGTATGCAACACCGGGGTATGTGGATTGGGTATCACAACGGCGCGCAACGTCAGGTTGCCTCTATTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9cbfad3fcf0b3b408ef9cdd665524dd19a6c8599fcafb748bea4f8995561da6b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6719
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequencing of a novel bacteriophage infecting APEC Chen,M. and Zhang,W. 2022-07-14 — GenBank