Protein

View in Explore
UniProt accession
D9ICW7 [UniProt]
Protein name
Gp34 long tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,56
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVAKSFRATSGLDAAGEKVINVGKASRSVLSDGVNVDFFNEFNTIQQYDSTRGYAAFMAIMYARRIWYARADIPSPAGAFDETKWISTRNDPKWVYNNVTSADGLPIESGTYLMADGRFSELTYILPDSPVEGDIITIKDGGGLAGVNNLLVRSNTRQIRLRDIQSSSYRLTHPYMTVAFIFNGNLWRVAEMRDNRDSQFVNATGAGSFQLQAGMTTFRNSGTGKITLQLPKYANDGDSITTYDLDKLSSVNVATLQVYPGSGHTITYDSINGVTSVASQRSGYGVFIFDQTNNRWVVYDGDNRVRLRRISDDLNMLPNDYVFVTPIAGNPPTVRNVTLTLPQDVAEGDRVYISMYMMGKTQNCTIKVKDGSGETIRTNKNMMQFPQRKDYPPNDWFSVDTLTFNADTDYLPYMELSYLKATKEWVVAQYRPIIERVDPTNRSRLGVIALATQAEVNKNLEDLPSDELAVTPRTLANKTATETRRGIARLATTAEVNQNTTATFLDDVIVTPKKLNERTATEDRRGVLEIATQAETNAGTDDTTAITPKKLDTRRASETLAGIGKLVTTGATTAEGALRGDAGTNVYNFNNGVDLITPKSLNEKTATEKSKGLVVLATENEVITGAAAGSATMPIVVTPEMLHRKTATETRIGLIEIATQAETNTGTDDLRAVTPKKLNDRKATEALDGIIALASTSEIAAGTVTNKAVVPVKLKEFFDVTGHIAVATDDGLTQSGTIWTTVNLGIASATETQRGTLRVATQGETDAGTLDTVFITPKKLQAKKATDTAEGIIRCATNAEAGAGTATNLAITPATMQFLNGTDPAWGATTLRRGAVFITTKSNTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNFALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNTFNGTSNFVGNVTTNGTLTANAAVTVNNTVTTNNNINQSAKANTVYANTVLSTATAGTKNLLRTFRGGVTDTTWHETVQASVYRLATGTTDLVDVLTVGDISNGALAYYGTNIRLNGKALANINTAGDLFVASDATPTVQLRTAATNGWNGVTISNDNGTTTATVINTRNFTQHLDSTYVNTAGDTMTGALSVSVNGTGGRFTSVSGTAHVQAGDFSGNVQKMRLTGIDDKVLTEFNINITDYNKAMINGNLIYHAGRKPTPAEIGAVAVAGSTVDTLVVRDYIKIGNVKIFANPTTKTCEFVWEE
Physico‐chemical
properties
protein length:1219 AA
molecular weight: 131072,16440 Da
isoelectric point:5,80709
aromaticity:0,07055
hydropathy:-0,24266

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
D9ICW7
1 1219
Domain Start End Length (AA) Confidence
N-terminal 1 353 353 0,6946
Central domain 354 708 356 0,1103
C-terminal 709 1219 510 0,5687
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-353
Central
354-708
C-terminal
709-1219

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage RB16
[NCBI] 		2681599 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus RB16
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADJ55560.1 [NCBI]
Genbank nucleotide accession
HM134276 [NCBI]
CDS location
range 162293 -> 165952
strand +
CDS
ATGGTAGCTAAATCATTCCGCGCCACAAGTGGCCTTGATGCTGCTGGCGAAAAAGTTATCAACGTTGGTAAAGCATCCCGCTCTGTGTTGAGCGACGGCGTGAACGTTGACTTTTTTAACGAATTTAACACGATCCAACAATACGATTCTACCCGTGGTTATGCTGCGTTTATGGCTATCATGTACGCGCGTCGTATTTGGTACGCTCGCGCAGATATTCCATCACCAGCGGGTGCTTTCGATGAAACAAAATGGATCTCAACCCGTAACGATCCAAAATGGGTATATAACAACGTAACCAGCGCTGACGGTCTCCCTATTGAGTCCGGCACGTACTTAATGGCTGATGGTCGTTTCTCTGAACTGACCTATATTCTGCCAGATTCCCCTGTTGAGGGTGATATTATCACCATTAAAGACGGTGGCGGTCTTGCAGGTGTAAACAACCTGTTGGTTCGTTCAAACACCCGACAGATCCGTTTGCGTGATATTCAGTCAAGCTCTTATCGTCTGACTCACCCATACATGACCGTAGCGTTTATCTTTAACGGTAACTTATGGCGTGTTGCTGAAATGCGTGATAACCGCGATTCGCAGTTTGTGAACGCAACAGGCGCGGGTTCTTTCCAACTACAAGCGGGTATGACAACGTTTCGTAATAGCGGTACTGGTAAAATCACTCTTCAATTGCCGAAATATGCAAACGATGGTGACTCTATCACTACCTACGATCTCGATAAACTCAGTTCGGTAAACGTTGCAACTTTACAGGTATATCCTGGTAGCGGTCACACTATCACTTATGATAGCATTAACGGCGTAACCTCTGTTGCTTCACAGCGTTCAGGTTATGGTGTGTTTATCTTTGATCAGACTAACAACCGCTGGGTTGTCTATGATGGGGATAACCGCGTTCGTCTGCGTCGTATCAGTGACGACCTGAACATGCTCCCGAATGATTATGTTTTCGTTACTCCTATTGCTGGGAACCCTCCTACAGTACGTAACGTAACATTAACCCTCCCGCAAGATGTTGCAGAAGGGGATCGCGTGTACATCAGTATGTACATGATGGGTAAAACGCAGAACTGTACGATCAAGGTTAAAGATGGTTCCGGTGAAACGATCCGCACCAACAAAAACATGATGCAGTTCCCACAGCGTAAGGATTATCCGCCTAATGATTGGTTCAGTGTTGACACTCTGACTTTCAACGCCGATACTGACTACCTTCCATACATGGAATTGTCGTATCTGAAAGCTACGAAAGAATGGGTAGTTGCACAATATCGCCCAATCATTGAACGTGTCGATCCAACAAACCGTTCTCGTCTGGGTGTGATCGCGCTGGCTACACAAGCAGAAGTAAACAAAAACTTGGAAGATTTACCGTCTGATGAACTGGCAGTAACCCCGCGCACACTGGCGAATAAAACCGCTACTGAAACGCGTCGTGGTATTGCTCGACTCGCAACGACAGCAGAAGTTAACCAGAACACAACGGCTACTTTCTTGGATGACGTAATCGTAACGCCTAAAAAGCTAAACGAACGTACAGCAACGGAAGATCGTCGCGGTGTGCTGGAAATCGCAACCCAGGCAGAAACAAACGCGGGTACTGATGACACTACCGCAATAACGCCTAAGAAGCTCGATACGCGTCGTGCAAGCGAAACCTTAGCAGGTATCGGAAAACTTGTCACAACGGGTGCTACGACAGCGGAGGGGGCTTTACGTGGGGATGCAGGGACTAACGTCTACAACTTCAACAACGGTGTTGATCTGATCACTCCTAAATCGTTGAACGAGAAGACGGCGACCGAAAAATCGAAAGGTTTAGTTGTTCTGGCAACGGAAAACGAAGTTATTACGGGCGCTGCTGCTGGATCTGCTACCATGCCGATCGTAGTCACTCCCGAAATGCTTCACCGTAAGACAGCAACAGAAACGCGTATCGGTTTGATTGAAATTGCAACTCAGGCAGAAACGAACACGGGAACCGATGATTTACGGGCGGTTACTCCGAAGAAACTGAATGATCGCAAAGCAACAGAAGCCCTTGATGGTATTATCGCGCTGGCAAGCACTTCCGAAATTGCAGCAGGGACAGTAACCAATAAAGCGGTTGTTCCGGTGAAACTGAAAGAGTTCTTCGATGTTACTGGACATATTGCGGTTGCAACTGATGATGGTTTGACTCAATCCGGTACTATCTGGACAACGGTTAACCTGGGGATTGCGTCTGCTACTGAAACACAGCGCGGTACTTTACGTGTTGCGACTCAGGGTGAAACTGATGCGGGTACTCTGGATACCGTGTTCATTACGCCTAAAAAACTGCAAGCGAAGAAAGCGACGGATACCGCCGAAGGTATTATTCGTTGTGCGACTAACGCGGAAGCGGGTGCGGGTACTGCTACTAACTTGGCAATTACTCCGGCTACCATGCAGTTCTTGAACGGTACTGATCCGGCTTGGGGTGCTACAACATTGCGCCGTGGTGCGGTGTTTATCACTACCAAATCGAATACGTTCATCGGTGATAATCTGGTTGGTTCTACTCAGCCTGTAGATAGCTATCTGGAAGATTTCTACGCTGTATCGCCTCGCGGTCTGAACTTTGCTCTGCAAAACTTCTTACCGAAAATGGCAACAGCACAGAATAGCTTGAGTCTGGGCGGTGTGGTAGCTGCAAGCTGGATGCGTCGTGATGCGGATCAAACCGTAACGGGCAACAACACGTTCAACGGTACAAGCAACTTTGTTGGTAATGTAACAACTAACGGGACTCTGACGGCTAACGCTGCGGTAACTGTTAACAACACCGTAACAACAAACAATAACATTAACCAGTCTGCGAAAGCAAACACGGTTTATGCTAATACTGTTTTGAGTACGGCAACCGCTGGAACTAAAAACTTGCTTCGTACCTTCCGTGGCGGTGTGACGGATACTACCTGGCATGAAACTGTTCAGGCAAGCGTGTATCGACTGGCAACAGGTACAACGGATCTGGTTGATGTTCTGACTGTAGGTGATATCAGTAACGGTGCTCTGGCGTACTACGGTACGAACATTCGCCTGAATGGTAAAGCCCTGGCTAACATCAACACTGCTGGTGATCTGTTTGTTGCAAGTGATGCGACTCCTACGGTACAATTACGAACCGCTGCAACTAACGGTTGGAACGGTGTAACAATCAGTAACGATAACGGGACAACCACTGCAACCGTGATCAACACCCGAAACTTTACCCAGCATCTTGACAGTACCTATGTCAATACAGCGGGTGATACTATGACTGGTGCGCTGTCAGTTAGCGTAAACGGCACGGGTGGACGCTTTACCAGTGTGAGCGGTACGGCACATGTTCAGGCGGGTGATTTCTCTGGTAACGTCCAGAAGATGCGCTTAACTGGCATTGACGATAAGGTATTGACTGAATTCAATATCAATATCACCGATTACAACAAAGCGATGATCAACGGAAACCTGATCTATCATGCAGGTCGTAAACCAACTCCGGCAGAAATTGGGGCGGTTGCGGTTGCGGGTTCAACTGTAGATACTCTGGTTGTTCGTGATTACATCAAAATCGGAAACGTAAAAATCTTCGCAAATCCAACAACTAAGACTTGTGAATTTGTGTGGGAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e0ea662f9cbd11b13f41ab88dfd64884d1ecd859482c73b58ae10d1cd1e996e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5658
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50