Protein

Genbank accession
CAF34289.1 [GenBank]
Protein name
short tail fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPVYSFSSDPLYVAEGQTIQFRYEAPPGFNAIEQVTIQIGELTTFWIIETRDEDFEPDGYELQDIDPAQTDTVFTYAETAAGPDEPPFGGGGGPPLRTGEEVITITGLSDTTQAPISISSNVVNSADYAFRIRRWNGTSYDPWPAFTTGDNVPAGTIFVSNQDQIQVRLKSSSAPADVKRVNVTVGTGSATWNITTGPLPVNIPNPAPEFGPLNGLDLDVQIYSNVVQINGLTTTADIAIDNSGEVAVSNSSTTSTNDDGYAVLTGVTWFSSTTVSNGQYVQLRGRSSVTPNTDKIFSVDIGSAPGIAAWNTRTGNGIDDTPDIILFTDLSNIIPGTNNIGSNVVTISGLTDGLFVPVVIREVETTDQTISNPRIRINGSSSGTFSNVTVENDDEIQLIVDSDPNVSNPLIPGQGSVSLAINVGDRLVPAWNVTNWTGPDTTPAFTQPTNLTNQVPGGVSVVGPIGLTDFNLDITVSVTTPQAYDETGSAVADPLGEVLISVNGDTAVAGPRIVSPDNTGNPVSITFFVNQPGNANIDPVEGLSWYSEFDITIGDAPTFTFRSFNYAVKPVPPSYKGIWYSNKNEFFDEVAYEAAGSPAANSGDYYRAPKFDGYSLGTVLPVTKENINGYGDLEARFPGFMECDGRSLNAADYPFLFDAIGSQYGGNGEYNPTTKEYTGTFNLPDYRNRRLVGTGIVDGNRGSSAFLEATNSGGSFEITGSSGGFWYVSDVGVAGPDPIEQVTVTSLGQNTGTTSDFFELGTPRTFGTELLETEVDFNVVGSVNAVIGPVGEIAVRVPQHEHFVITGVPADFSGDPVIPWNARAYYGTAEAGDGTTAEVSDEPSSDTVYNLWTTIGGINSGVFSSELGDMDGSTLRDYLPLGPEDGNTNATFGNYWGTTTGPLTSLSPSTSYFRQSGTMNDAAVLDTTEDSTRVDAYISIYGELSHSHLLGEDKVDDPNTDYTYGNSDAAGAKRGLANFSNVHTLTFNQADVAIELNTAAFSWNNATKPIPTVALDPQRKVPILAPFHKIKYIIKVY
Physico‐chemical
properties
protein length:1037 AA
molecular weight: 110426,62900 Da
isoelectric point:4,08720
aromaticity:0,09740
hydropathy:-0,22623

Domains

Domains [InterPro]
IPR037053
612–687
IPR037053
IPR011083
638–689
IPR011083
SSF88874
639–758
SSF88874
CAF34289.1
1 1037
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-PM2
[NCBI] 		238854 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales >
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAF34289.1 [NCBI]
Genbank nucleotide accession
AJ630128.1 [NCBI]
CDS location
range 184683 -> 187796
strand +
CDS
ATGCCAGTTTATAGTTTTAGTAGCGATCCATTATACGTAGCAGAAGGGCAAACTATTCAGTTTCGCTATGAAGCTCCTCCTGGTTTCAATGCCATTGAACAGGTTACGATCCAGATTGGTGAACTAACAACTTTCTGGATTATTGAAACCCGTGATGAAGATTTTGAACCTGATGGATACGAATTGCAGGATATTGATCCTGCACAAACTGATACTGTTTTTACTTATGCTGAAACTGCAGCAGGTCCAGATGAACCACCTTTCGGAGGTGGAGGTGGTCCTCCTCTAAGAACTGGCGAAGAAGTTATTACAATTACTGGATTATCTGATACTACTCAAGCTCCAATATCTATTTCTTCTAATGTAGTTAATTCTGCAGATTATGCATTCAGAATTAGAAGATGGAATGGCACTTCATATGATCCATGGCCAGCATTTACTACGGGCGATAATGTTCCTGCAGGTACAATTTTTGTATCTAATCAAGATCAAATTCAGGTAAGACTTAAATCTTCTTCTGCACCAGCTGATGTTAAGCGAGTTAATGTTACAGTTGGAACTGGTAGCGCAACATGGAATATTACAACTGGACCACTTCCAGTAAATATACCAAATCCAGCACCAGAATTTGGTCCTTTGAATGGTCTAGATTTAGATGTTCAAATTTATAGTAATGTTGTACAGATAAATGGACTGACAACAACTGCAGATATTGCTATTGATAATTCTGGTGAAGTTGCAGTATCAAATTCTTCAACGACATCCACTAATGATGATGGATATGCAGTATTGACTGGAGTAACATGGTTTTCATCTACAACAGTTAGCAATGGTCAGTATGTTCAATTAAGAGGAAGATCTTCAGTTACTCCAAATACAGATAAGATTTTCTCCGTTGATATTGGATCTGCTCCTGGCATTGCTGCGTGGAATACTAGAACAGGAAATGGTATTGATGATACGCCAGATATAATATTATTTACAGATCTGAGTAATATTATTCCAGGAACCAATAATATTGGATCAAATGTTGTTACAATTAGTGGTTTAACTGATGGATTATTTGTTCCTGTCGTTATACGAGAGGTAGAAACTACAGATCAAACAATATCAAATCCAAGAATTAGAATTAATGGAAGTTCGTCAGGAACATTTTCAAACGTTACTGTAGAAAACGACGACGAAATTCAATTGATTGTTGATTCTGATCCTAATGTATCAAATCCACTTATACCTGGACAAGGTTCAGTTTCTCTTGCGATTAATGTTGGAGATAGATTAGTTCCAGCATGGAATGTAACAAACTGGACTGGACCAGATACAACTCCCGCATTTACTCAACCTACTAATCTAACAAATCAAGTTCCAGGTGGTGTAAGTGTAGTTGGACCTATTGGATTAACTGATTTTAATCTTGATATTACAGTTTCTGTGACAACTCCTCAAGCATATGATGAAACTGGCAGTGCAGTTGCGGATCCTTTGGGTGAGGTATTAATTTCCGTAAATGGTGATACTGCTGTTGCTGGACCTAGAATAGTTTCACCTGATAATACAGGAAATCCAGTCAGTATTACTTTCTTTGTAAATCAACCAGGAAATGCAAATATTGATCCAGTTGAAGGATTATCATGGTATTCTGAATTTGATATTACAATAGGAGATGCACCAACTTTTACATTTAGATCTTTTAACTATGCAGTAAAACCAGTTCCTCCATCATATAAAGGAATATGGTATTCAAATAAGAATGAATTCTTTGATGAAGTAGCATATGAAGCAGCTGGATCACCTGCTGCAAATTCTGGAGATTATTATAGAGCACCTAAATTTGACGGATATTCTCTTGGAACTGTCTTACCAGTTACAAAGGAAAATATTAACGGATATGGTGATTTGGAAGCAAGATTCCCTGGATTTATGGAATGCGATGGAAGATCATTAAATGCTGCAGATTATCCATTCTTATTTGATGCAATTGGATCTCAATATGGCGGAAATGGTGAATATAATCCAACTACAAAAGAATATACGGGTACATTTAATCTACCAGATTATAGAAATAGAAGATTAGTTGGTACTGGTATTGTTGATGGAAATAGAGGATCTTCTGCTTTCCTTGAAGCAACAAATTCTGGAGGATCTTTTGAAATTACAGGTTCATCTGGAGGATTCTGGTATGTTTCTGATGTTGGTGTTGCTGGCCCAGATCCTATTGAACAAGTTACAGTTACATCACTAGGACAAAATACTGGAACAACATCAGACTTTTTTGAATTGGGAACTCCAAGAACATTTGGAACCGAACTACTTGAAACTGAAGTTGATTTCAATGTTGTTGGTAGTGTGAATGCAGTAATTGGACCTGTTGGAGAAATTGCAGTTAGAGTTCCTCAGCATGAACACTTTGTGATTACTGGAGTTCCTGCTGATTTTAGCGGCGATCCAGTAATTCCATGGAATGCAAGAGCATATTATGGAACAGCAGAAGCTGGAGATGGAACAACTGCTGAAGTTAGTGATGAGCCATCCTCAGATACTGTTTATAATCTATGGACTACTATTGGTGGTATTAACTCTGGTGTATTCAGTTCAGAACTTGGTGATATGGATGGATCTACATTGAGAGATTATCTCCCACTCGGACCAGAAGATGGTAATACAAATGCCACATTTGGAAACTATTGGGGAACAACAACTGGACCATTAACTTCTCTATCTCCATCTACATCATATTTCAGACAAAGTGGAACTATGAATGATGCTGCAGTTCTTGACACAACTGAAGATAGCACGAGAGTAGATGCATATATTTCGATTTATGGAGAACTTTCTCATAGTCACTTATTGGGCGAGGATAAAGTGGATGATCCAAATACAGACTACACGTATGGCAATTCAGACGCTGCTGGAGCTAAGAGAGGATTGGCGAATTTCTCTAATGTCCATACCTTGACATTCAACCAAGCCGATGTAGCAATTGAATTAAATACTGCTGCATTTAGTTGGAACAATGCTACAAAACCAATTCCAACGGTTGCATTAGATCCACAAAGAAAAGTGCCTATTTTAGCACCATTCCACAAGATCAAATATATAATAAAGGTGTATTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
785ae4375a83bcec04a7ca0786836dc9f4a26d526f003237850a862a7ca0f0b8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5564
Evidence 0,5564
Download PDB

Literature

No literature entries available.