Protein

Genbank accession
AUR98530.1 [GenBank]
Protein name
pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTKVNNRMIDGATVNVLDFGADPSGQTDSTSQIQEAINTAKTQGVIVDFPGGSYLISAPLTIQAGQHLRGVNGRLTGSFKDVEIITTTAGLDSLLNISLGHYCKIEGINFSCNGFANTGIRGVNVFGAVLENLRVDTALFEGVVFQNDGTDIGCFGNRLVKVAVGDCDTGIFLGSTGGNLNLTVLEQCVITNCDYGVREFGDQRGRDNSYLNIDIENCRIGMYLQGTSFRVTGGYFEFNDTNIQVNNSPNNLQQQTGYIGQNSFLGSYNFPGTPAKDTIGITASDAYNLTIDTNWFAYCKQGIYLDAGCQWNELRNNFMGAVGSSNVETRYSDFGEYNTISQGNQRTKQVQQHAGAGPFFTSSSYNLVACDIGNNATTLQVSDVTDWLEGYETEIYTLMSSSNTGSVTITTAGSALFYGQVSGNRVYGASTITIGYGDRVTLTATSSGDFLVRSSNSIQ
Physico‐chemical
properties
protein length:460 AA
molecular weight: 49391,95390 Da
isoelectric point:4,50673
aromaticity:0,09783
hydropathy:-0,17761

Domains

Domains [InterPro]
IPR012334
13–358
IPR012334
IPR011050
13–325
IPR011050
IPR024535
15–223
IPR024535
AUR98530.1
1 460
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.253.O._10N.286.45.B12
[NCBI] 		1881270 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98530.1 [NCBI]
Genbank nucleotide accession
MG592619 [NCBI]
CDS location
range 5945 -> 7327
strand +
CDS
ATGACAACTAAAGTTAATAATCGAATGATTGATGGGGCTACTGTTAACGTTCTAGATTTTGGTGCAGACCCTTCTGGACAAACAGATAGCACGTCTCAGATCCAAGAGGCAATCAACACTGCTAAGACACAAGGGGTTATTGTTGATTTCCCCGGAGGCTCTTACTTGATCAGCGCCCCCCTTACAATTCAGGCAGGGCAACATTTACGTGGAGTGAACGGTCGTTTAACTGGATCCTTTAAGGATGTGGAAATAATCACAACCACTGCTGGTCTCGACTCATTATTAAATATAAGCCTTGGGCACTATTGTAAGATTGAAGGAATTAACTTCTCTTGTAATGGATTCGCAAACACAGGAATACGCGGGGTAAATGTATTTGGCGCTGTGTTAGAGAACTTACGTGTTGACACCGCGTTGTTTGAAGGTGTTGTTTTTCAAAACGACGGTACAGATATCGGGTGTTTCGGGAACAGGTTGGTTAAAGTTGCAGTGGGGGATTGTGACACAGGGATTTTCCTAGGGTCTACTGGAGGTAATCTGAATCTAACAGTCCTTGAACAGTGTGTTATCACTAATTGCGATTACGGTGTCAGAGAGTTTGGGGATCAGAGAGGGCGTGATAACAGCTATCTTAATATAGATATCGAAAACTGCCGCATAGGTATGTACTTACAAGGGACGAGTTTTCGTGTTACAGGCGGTTACTTTGAATTTAATGACACGAATATACAGGTTAACAACAGCCCAAATAACTTGCAACAGCAGACAGGTTATATAGGTCAGAATAGTTTTTTAGGATCTTATAACTTTCCGGGGACACCTGCTAAAGACACTATAGGTATTACTGCAAGTGATGCGTACAACCTGACAATAGATACAAACTGGTTCGCATACTGCAAGCAAGGTATCTACTTGGACGCTGGATGCCAGTGGAATGAGTTGCGTAACAACTTCATGGGTGCCGTAGGTTCGTCCAATGTGGAAACACGTTACTCTGATTTTGGGGAGTACAACACTATTTCTCAAGGTAATCAAAGAACTAAGCAGGTGCAACAACATGCTGGTGCGGGGCCTTTCTTCACCTCATCTAGTTATAATCTTGTAGCATGTGACATCGGCAACAATGCAACAACCTTGCAAGTATCTGATGTAACAGATTGGTTGGAGGGGTACGAAACTGAGATCTATACTTTAATGTCTTCTAGCAACACCGGTTCTGTTACAATTACCACTGCGGGCTCTGCACTATTCTACGGACAGGTCTCGGGGAACAGGGTATACGGAGCTTCTACAATTACTATTGGGTATGGGGATCGTGTCACTTTAACAGCTACATCTAGCGGTGACTTCCTAGTAAGAAGCTCTAATTCAATTCAATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6263cee2520e75a3ddde540903c64c1314e50b473f8f189c8b9799b197f7fa2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8250
Evidence 0,8250
Download PDB

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank