Protein

View in Explore
Genbank accession
WEM34246.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVTQYLYTDTDAPVLYGQPGAFITVLKAVLVNGYGTKPGMGWTLEYESGTIAVFRNSTAAGSTGMYLRVDDSNWQYAIVKAYKTMSDISTGTDAIPGVLPSYSNSNIFWPKSANNNNNAIMWNFIGDERTFYLNICPWSSQNANQFANYAYIYAAGDYDSYVPSFAHNYFVAGNYDGGYSSNGPCMIDDQSSYVCCAIGRAQDNVADKYSKAWVSYMAGGVPSGSYNHQAFSVYTGQRIFYPAYVMENAVQTNITGKWRGLYGMVGRSNFTWNENYGKLPNNPTGPDLIQFTVSNNSSQGVYILNGGW
Physico‐chemical
properties
protein length:309 AA
molecular weight: 34045,34520 Da
isoelectric point:5,08444
aromaticity:0,15858
hydropathy:-0,28835

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WEM34246.1
1 309
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,7782
Central domain 11 207 198 0,0025
C-terminal 208 309 101 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-207
C-terminal
208-309

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage X1
[NCBI] 		2511832 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris str. 8004
[NCBI] 		314565 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas campestris

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEM34246.1 [NCBI]
Genbank nucleotide accession
OQ427096 [NCBI]
CDS location
range 15470 -> 16399
strand +
CDS
ATGGCAGTTACCCAGTATCTCTACACCGACACCGACGCTCCAGTTCTCTACGGGCAGCCTGGGGCTTTCATCACAGTGCTGAAAGCTGTTCTTGTGAACGGTTATGGCACCAAGCCTGGTATGGGTTGGACGCTAGAGTACGAGTCAGGAACGATCGCAGTATTCCGTAACTCGACCGCTGCGGGCTCGACAGGCATGTACCTGCGAGTAGATGACTCTAACTGGCAGTATGCGATTGTCAAGGCCTACAAGACAATGTCGGACATTTCGACTGGAACTGATGCTATTCCTGGCGTCCTGCCTTCTTACAGCAATTCAAATATCTTCTGGCCTAAGTCAGCAAACAATAACAACAACGCTATCATGTGGAACTTCATCGGCGACGAGAGAACGTTCTACCTGAATATTTGTCCTTGGTCAAGCCAGAACGCTAATCAGTTTGCGAACTATGCGTATATCTACGCTGCGGGCGATTACGACTCCTACGTTCCTAGCTTTGCTCACAACTATTTTGTGGCAGGAAATTACGACGGTGGCTATTCATCGAATGGTCCTTGTATGATCGACGATCAGAGTTCCTACGTATGCTGTGCTATTGGACGTGCGCAGGACAATGTCGCTGACAAATACTCCAAGGCATGGGTAAGCTACATGGCAGGTGGTGTACCTTCCGGATCATACAATCATCAAGCGTTCTCAGTCTACACAGGACAGAGAATCTTCTATCCTGCATATGTGATGGAAAATGCTGTCCAGACCAATATCACAGGTAAGTGGCGTGGTTTGTACGGAATGGTAGGTCGCTCAAACTTCACATGGAATGAGAACTACGGCAAGCTCCCAAACAACCCAACCGGTCCTGATTTGATTCAGTTCACAGTTTCCAATAACAGCAGTCAGGGCGTCTACATCTTGAACGGAGGCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
493393218c29e86b777d5411e75f2496bd53da735f9277891de5b3d5ae514ae6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7408
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50