Protein

View in Explore
Genbank accession
UYL05848.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,62
TSP
Evidence RBPdetect2
Probability 0,77
Protein sequence
MHVGNRQGVHIGWNESNGSGEAVFLNNQGVGDGGFVFRTVNAANSVEKGRVDFTQDGVIYAKHLQVRSGARIESNNNIVGQSLYAGMGNAALGPDGNLSGGVWNNVGGNLWGMLHDNYRFAKPPAGVRLYTGRGGDYIEGNVDGTSVGFRWFQSDRRLKENIKVVRSADDMLNIIRSYIPVSYKYKDSEYVDNRGKTVTVTGKNSRAGFITQDLIRIWPEAVDIMSDGMQSPDPNQIIGGLMLLVKNLDERVQALESKLMTD
Physico‐chemical
properties
protein length:262 AA
molecular weight: 28687,81630 Da
isoelectric point:6,92210
aromaticity:0,08397
hydropathy:-0,40878

Domains

Domains [InterPro]
DC_1141
STR
3–261
DC_1141
IPR030392
CHP
154–222
IPR030392
IPR030392
CHP
154–259
IPR030392
UYL05848.1
1 262
Architecture
STR
STR 3-261 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYL05848.1
1 262
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1043
Central domain 11 209 200 0,1496
C-terminal 210 262 52 0,9982
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-262

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KP13MC5-2
[NCBI] 		2985664 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYL05848.1 [NCBI]
Genbank nucleotide accession
OP617747.1 [NCBI]
CDS location
range 38618 -> 39406
strand -
CDS
ATGCACGTAGGGAACCGTCAAGGTGTCCACATTGGGTGGAACGAGTCGAACGGTAGTGGCGAAGCTGTCTTTTTGAATAACCAAGGTGTTGGTGATGGTGGGTTCGTGTTCCGTACAGTTAACGCCGCCAACTCAGTTGAGAAGGGTCGCGTCGATTTTACTCAGGACGGTGTCATCTATGCGAAACACCTACAGGTTCGTTCAGGTGCCCGAATTGAGTCGAACAACAACATCGTAGGTCAGAGCCTCTACGCAGGAATGGGCAACGCGGCACTTGGCCCGGATGGGAACCTTAGCGGTGGCGTATGGAACAACGTTGGGGGCAACCTTTGGGGAATGCTCCACGACAACTACAGGTTCGCCAAACCTCCTGCTGGGGTTCGCCTATACACAGGCCGTGGTGGTGACTACATTGAGGGTAACGTTGATGGTACATCCGTTGGGTTCCGCTGGTTCCAGTCTGACAGAAGACTGAAAGAGAACATCAAGGTTGTTCGCTCTGCTGATGATATGCTCAATATTATCCGCTCGTATATTCCGGTTTCCTATAAATATAAGGACTCTGAGTACGTTGACAACCGTGGGAAGACTGTTACTGTCACCGGTAAGAACTCTCGTGCTGGTTTCATTACTCAGGACTTGATTCGAATCTGGCCAGAGGCGGTTGATATAATGAGCGACGGTATGCAGTCTCCAGACCCTAACCAGATTATTGGCGGACTGATGCTGCTTGTTAAGAACCTAGATGAACGTGTTCAGGCGCTTGAATCTAAACTTATGACAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
afbc3dc0e400b2502d745a11eb0d2ab31f849047017a1ebd89da821a71bc25a3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6778
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage therapy against pathological Klebsiella pneumoniae that determine the clinical course of primary sclerosing cholangitis Ichikawa,M., Nakamoto,N., Kredo-Russo,S., Weinstock,E., Weiner,I.N., Khabra,E., Ben-Ishay,N., Inbar,D., Kowalsman,N., Mordoch,R., Nicenboim,J., Golembo,M., Zak,N.B., Suzuki,T., Miyamoto,K., Teratani,T., Fujimori,S., Aoto,Y., Konda,M., Hayashi,N., Chu,P.-S., Taniki,N., Morikawa,R., Kasuga,R., Tabuchi,T., Sugimoto,S., Mikami,Y., Shiota,A., Bassan,M. and Kanai,T. 2023-06 — GenBank