Protein

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UniProt accession
A0A8S5NYY0 [UniProt]
Protein name
Leucine-rich repeat protein
RBP type
TSP
Evidence RBPdetect
Probability 0,65
Protein sequence
MDINIKIDGQIARITNTAEICSGNIKVNGLAFEFSKEWDEFPTKTAVIYVDDYDKKTATSVLIEDNRVDADLLPADLFKKKCVLYVGVIGSNDNEQRITSTVVGQRIKKGTPTDAVQLVDIDIFAQIIAIMNETKNVCDSAIHAVDNNIKYMQRAEEASNQASKSADKAVQAVDGIDASVEKAKVSEQNAKTSENNALAAKKSIDEVMADYDYLMGIENFRTKVIQVLKEKGITIDDNAKLDDALVQAIDSISTLQGLDDYISNDIIDYINKKLTQLGQYKFYYMPSIHNVRCDAVINIGKYTLYGCSSLKHLYFPNVVSIEEHVFHTLGCENLILPNLKTMGSACFVNTTTLKRLIIPKCVSLTPNTCSSTGIYLLDAGNTSLIPSSSSMPNLTILVLRNNVLTTLENRSCIRSIEEIYVPQDLIESYKVATNWSVYADKFKPLEGSKYEPLDWYKEEDWYKEEMKVWE
Physico‐chemical
properties
protein length:470 AA
molecular weight: 52619,32310 Da
isoelectric point:4,95246
aromaticity:0,07872
hydropathy:-0,21085

Domains

Domains [InterPro]
DC_0649
ATT
18–248
DC_0649 SSF52058
IPR032675
STR
221–443
IPR032675
IPR032675
STR
221–445
IPR032675
IPR026906
STR
270–362
IPR026906
A0A8S5NYY0
1 470
Architecture
ATT
STR
ATT 18-248 | STR 249-445 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5NYY0
1 470
Domain Start End Length (AA) Confidence
N-terminal 1 256 256 0,9924
Central domain 257 459 204 0,7562
C-terminal 460 470 10 0,5324
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-256
Central
257-459
C-terminal
460-470

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ct6bb17
[NCBI] 		2825345 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD99623.1 [NCBI]
Genbank nucleotide accession
BK015290 [NCBI]
CDS location
range 29243 -> 30655
strand +
CDS
ATGGATATTAATATAAAAATTGACGGACAGATTGCACGAATTACAAACACAGCAGAAATCTGTTCAGGAAATATTAAAGTAAACGGTTTAGCGTTTGAATTTTCAAAAGAATGGGACGAGTTTCCAACCAAAACAGCCGTAATATATGTAGATGATTACGACAAGAAGACAGCGACTAGCGTATTAATTGAAGATAACAGAGTAGACGCAGATTTACTTCCTGCTGATTTATTCAAGAAGAAATGTGTTTTGTATGTTGGAGTAATCGGAAGTAATGACAACGAACAGCGTATCACTTCAACCGTTGTAGGACAACGAATTAAAAAAGGGACACCTACAGATGCCGTACAGTTGGTTGATATTGACATCTTCGCGCAGATTATCGCAATTATGAACGAAACAAAGAATGTATGCGATAGTGCTATACACGCAGTAGATAACAACATCAAATACATGCAGAGAGCAGAAGAAGCAAGCAATCAGGCTTCTAAATCTGCCGACAAGGCTGTACAAGCTGTTGACGGAATTGACGCAAGCGTTGAAAAGGCTAAAGTTAGCGAGCAAAACGCAAAGACAAGCGAAAATAACGCACTAGCAGCAAAGAAGTCAATTGACGAAGTGATGGCTGATTATGATTATTTAATGGGAATTGAAAATTTTAGAACGAAAGTTATTCAAGTATTGAAAGAAAAAGGCATAACTATAGATGATAACGCAAAATTAGATGATGCGTTAGTACAAGCTATTGATAGTATTAGTACGTTGCAGGGGTTAGATGACTATATTTCGAATGATATTATTGACTATATTAACAAAAAACTAACGCAATTAGGACAGTATAAATTTTATTATATGCCTAGCATTCATAACGTGAGATGTGATGCAGTTATTAATATAGGAAAATACACTCTATATGGTTGTTCGAGTTTAAAACATTTATACTTTCCAAACGTAGTTAGTATAGAAGAACACGTGTTTCACACACTGGGATGTGAAAACCTTATTTTGCCAAATTTAAAGACAATGGGTTCAGCTTGCTTTGTGAATACAACCACATTAAAACGTTTAATTATTCCTAAATGTGTATCACTAACCCCGAATACCTGTTCTTCAACTGGAATATATTTGTTAGATGCAGGGAATACATCTCTTATTCCTTCATCATCATCTATGCCGAATTTGACGATATTGGTATTAAGAAATAATGTATTGACTACACTCGAAAATAGAAGTTGTATTCGGTCTATTGAAGAAATCTACGTCCCACAAGACCTAATTGAATCCTACAAGGTAGCGACAAATTGGTCTGTTTATGCCGACAAATTCAAGCCATTAGAGGGTAGCAAGTACGAGCCATTAGATTGGTACAAGGAAGAAGATTGGTATAAAGAAGAAATGAAAGTATGGGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0c40305ed8383bb4262e78241677a894e454f6496222cf7ae80c0c7429aa50ad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50