Protein

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Genbank accession
XPO96676.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVTNTITTQASQSPRLAVDVVVTGAISHGFVHTRGWSTFAYGLVCTYNGGAGLYLVGDNNNTHWDGMWSHNTGIGVYVQNSAAVSFSGSFENNGEQGCLVDANAVIASGYVNTESSVITFTDGCYFESNGQNAAGTYPELQFGGNGGGTVRDCSVSAAHIGVPLSGIGIQFNGSAKRVTVDCSGLYPVNTPTAFIRYSAAYTSLAVVINADHKFINLDVAANRILSLGFADTDGMLAAYVLGGGSQSASGKDNILKTVRLTDANNTGTYLERIYRGAELISERGVKPNVQVWNNAASSSGFHSFAVGGTEVVRIAGTSLQPRVDNTLSLGTASLRWSTVYASNGTINTSDETLKTPVITETAREAVAAGAIKSSIYPYKWVDGSDGDKVHFGVGAQTVESILKRNGLNPEKYAFLFKEKDDKGKLTYGIRYNELIMFILKYI
Physico‐chemical
properties
protein length:442 AA
molecular weight: 46909,77960 Da
isoelectric point:6,07640
aromaticity:0,09729
hydropathy:-0,05814

Domains

Domains [InterPro]
DC_0783
STR
3–432
DC_0783
IPR012334
STR
277–349
IPR012334 IPR030392
IPR030392
CHP
349–406
IPR030392
IPR036388
RBD
350–442
IPR036388
XPO96676.1
1 442
Architecture
STR
RBD
STR 3-432 | RBD 433-442
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO96676.1
1 442
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0064
Central domain 11 236 227 0,9899
C-terminal 237 442 205 0,9551
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-236
C-terminal
237-442

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EM1
[NCBI] 		3385242 Viruses >
Host Escherichia marmotae
[NCBI] 		1499973 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO96676.1 [NCBI]
Genbank nucleotide accession
PQ571293.1 [NCBI]
CDS location
range 29764 -> 31092
strand +
CDS
ATGGTGACAAATACAATAACAACACAAGCATCTCAATCCCCGAGACTGGCTGTAGATGTTGTTGTGACGGGAGCCATATCGCATGGTTTTGTTCATACGCGAGGGTGGTCAACATTCGCTTACGGTCTGGTTTGTACGTATAACGGCGGGGCCGGTTTATATCTTGTCGGGGATAACAATAACACACACTGGGACGGAATGTGGTCGCATAACACCGGGATAGGTGTATATGTGCAAAACTCCGCTGCCGTTTCATTTAGCGGAAGCTTCGAGAACAATGGTGAGCAGGGATGTTTGGTAGACGCCAATGCCGTAATCGCGTCCGGGTACGTTAATACGGAATCTTCTGTAATAACTTTTACGGATGGATGTTATTTCGAGAGCAATGGTCAGAATGCCGCCGGAACATACCCGGAGCTACAATTTGGTGGTAACGGTGGTGGTACGGTACGTGACTGCTCTGTATCGGCAGCACACATAGGTGTGCCTTTATCCGGAATCGGTATCCAGTTCAATGGCTCCGCCAAGCGTGTGACTGTAGATTGTTCGGGTCTGTATCCGGTGAACACCCCTACGGCGTTCATTAGATATTCTGCGGCGTATACCAGTCTAGCCGTGGTAATTAACGCAGACCATAAATTCATTAACCTCGACGTGGCAGCTAACCGTATCCTGTCGCTCGGATTCGCAGATACAGACGGTATGCTAGCGGCATATGTTCTTGGTGGCGGTTCTCAGTCAGCTTCTGGTAAGGATAATATCCTGAAAACGGTAAGGCTTACGGATGCAAATAACACTGGAACCTACCTGGAGCGTATCTATCGCGGAGCGGAATTAATATCCGAACGCGGAGTTAAACCGAACGTGCAGGTATGGAACAATGCTGCAAGTTCTAGTGGTTTTCACTCTTTTGCGGTTGGAGGCACTGAGGTGGTGCGTATAGCAGGAACTAGCCTACAACCGCGGGTTGATAACACCCTATCATTAGGCACAGCCTCGCTTAGATGGTCAACTGTGTACGCGTCTAACGGTACTATAAACACTTCTGATGAAACGCTGAAGACACCGGTAATTACTGAAACAGCCCGTGAAGCGGTCGCCGCAGGTGCCATAAAATCGTCCATTTATCCCTACAAATGGGTTGATGGTAGCGACGGGGATAAAGTTCACTTTGGGGTTGGCGCCCAGACGGTCGAGAGTATACTAAAGCGCAACGGTCTTAACCCTGAAAAATACGCATTTCTTTTTAAAGAGAAAGACGATAAAGGTAAACTGACTTACGGCATCCGGTACAACGAACTGATAATGTTTATCCTTAAGTATATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
44c989c1c25e7453b49c4a0c567e4fec38f7516fc7d6a0813651bb58b986403f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7271
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50