Protein

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Genbank accession
YP_010000117.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MAVETGTANGNIDLMNKLMTFLSTHPDLVSSDQQWEVLRNEDYPISFPFPGRIAFANYGSSRSTMPDVFPTALPVQNCKARFQGKLNAPSAGTYVFSIIVNKQCRVLIDGALAGGVFSPNWSTSNTPFTQTFTINLTAGLHDIVVDAVFSDTSYSGLSLGWKTPGDSAFSIIPASAFSSMTARYGWTQYWNPSAADMAATSADREYVLKGPGLAGQDEIFLAIRTASSAQADVYNAMITYAVGFEPSALYSAQPGVGNSSFMLLWNQAIKYWFIANGRRFIVIAKVSTTYASMYGGFILPYGLPTEIPYPVASGANAGADRRWSDQTEENSSFWNPASYNPNDGVTSLTMRRPNGTIESFANIHYSPTPDARTYPYYNRIAFRPSPDNQYALQPVVLYSVAAGKNVWGELQGVFHISGYNNASENTLPIGGKTYLVVQSAFRTTASDYAAILLE
Physico‐chemical
properties
protein length:454 AA
molecular weight: 49439,80650 Da
isoelectric point:5,47851
aromaticity:0,12996
hydropathy:-0,11167

Domains

Domains [InterPro]
IPR037524
RBD
28–176
IPR037524
IPR011658
RBD
34–174
IPR011658
G3DSA:2.60.120.380
ATT
50–158
G3DSA:2.60.120.380
IPR011658
RBD
67–170
IPR011658
SSF56988
STR
76–205
SSF56988
DC_0072
STR
155–454
DC_0072
YP_010000117.1
1 454
Architecture
RBD
ATT
STR
RBD 28-49 | ATT 50-158 | STR 159-454
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae-SS2019XI
[NCBI] 		2660688 Uroviricota > Caudoviricetes > Casjensviridae > Maxdohrnvirus SS2019XI >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010000117.1 [NCBI]
Genbank nucleotide accession
NC_053013.1 [NCBI]
CDS location
range 15066 -> 16430
strand +
CDS
ATGGCCGTCGAGACCGGCACCGCAAACGGGAACATCGACTTGATGAACAAGCTGATGACCTTCCTATCCACCCACCCGGACCTGGTTAGCAGCGACCAGCAGTGGGAGGTACTGCGCAACGAAGACTATCCGATCAGCTTCCCGTTCCCCGGACGAATCGCTTTCGCGAACTATGGCAGCTCGCGCTCGACAATGCCGGACGTGTTCCCTACAGCACTCCCGGTGCAGAACTGTAAGGCTCGCTTCCAGGGTAAGCTCAACGCTCCGAGTGCTGGAACCTATGTCTTTTCGATCATCGTCAACAAGCAGTGCCGAGTGCTGATTGATGGAGCGCTCGCCGGAGGCGTGTTCTCGCCAAATTGGTCGACCAGTAACACCCCCTTCACTCAGACGTTCACTATCAACCTGACTGCGGGGCTGCACGACATAGTCGTCGACGCAGTGTTTAGCGATACCAGCTACTCGGGACTCAGCCTCGGATGGAAGACTCCAGGCGACAGCGCCTTCTCGATCATTCCGGCATCAGCATTCAGCAGCATGACGGCGCGGTACGGCTGGACCCAATACTGGAACCCTTCAGCGGCAGACATGGCCGCGACCTCTGCGGATCGGGAGTATGTTCTGAAAGGTCCCGGCTTGGCTGGCCAGGATGAGATCTTCTTAGCGATCCGTACCGCCAGCTCTGCGCAGGCCGACGTCTACAACGCGATGATCACCTACGCAGTAGGGTTCGAGCCGAGCGCCCTCTACAGCGCGCAACCGGGGGTGGGTAATAGCAGCTTCATGCTGTTGTGGAACCAAGCCATCAAGTACTGGTTTATAGCCAATGGCCGCCGCTTTATCGTGATCGCAAAGGTCTCGACGACCTACGCCAGCATGTACGGCGGCTTCATCCTGCCGTACGGCCTGCCGACCGAGATCCCGTACCCGGTAGCCAGTGGAGCGAATGCAGGGGCTGACCGCCGATGGTCGGATCAGACCGAGGAGAACTCGTCGTTCTGGAACCCCGCAAGCTACAACCCCAACGACGGTGTGACCTCGCTGACGATGCGGCGCCCTAACGGCACAATCGAATCGTTCGCCAACATCCACTACTCGCCGACCCCGGACGCTCGGACGTATCCGTATTACAACCGCATCGCGTTCAGGCCATCCCCGGACAATCAGTACGCGTTGCAGCCGGTAGTCCTTTACTCCGTTGCCGCGGGCAAGAACGTGTGGGGAGAGCTGCAGGGGGTGTTTCACATCTCGGGCTACAACAACGCGTCCGAAAACACACTGCCAATCGGCGGCAAGACCTACCTGGTCGTCCAGAGCGCGTTTCGGACCACGGCTAGCGACTACGCAGCCATTCTGCTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0648d70622587ac67e1beaa0ae92df450a570b8298c6577648aca238d83c1c55
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6509
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of the temperate Pseudomonas aerugionosa phage vB_Pae-SS2019XI Hammerl,J.A., Jaeckel,C., Schnehle,S. and Schmoger,S. 2003-08 — GenBank