Protein

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Genbank accession
YP_008060785.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLKTGTTIGGNTIWSQANLPLLTNGNTLTYKGFKVYTENDKPTKAEIGLGNVTNDAQVKKSGDEMTGDLTLKNNSQLTVPRCINLVSDTTNLAPWLLTTRSDNNAVTDPFPSQHTRTFTLFINTKSNTSDPGGGANLAALLSHQATTGAGSIELQAYDAPNKTTGATGILRAQIGLNGWDGSINLAGASLNVGMTTTINSNLYANELISKGAGNRNVTMQDTNGNELAMLFADTGKNLYVRTGGSYVSRFAADGTLILANGLTVPRQVFVNGASLPVNNGQVRLDTSADGNAVGDGATHLGMKLEDGKYYHYFRGAGVMYIDMKGGISSSTPLYMNGVDQAIPKVEMLSTGAAGAKNFLRRFRGGLPDIIWHETVQGGDYRLAIGDTDADYQLRISADGANRGGYVFGGTFTADRGNDGFKIRYKPDTESAMFQIWNRDTSVLNSYFGYGSSNQATVNLYNRLGDIGVSTPNAAFRLDNTTLTLGNSSSAEASQRAFTIRNWGNNSAGGYRAAVLEVGDGTSYHFYSQRRSDNLVEIAFVGDAYVNGTTFLQNNARVRGSDGISIEADTNCHVWFRTAGGAEKAVLYAENNGSVKLRTSNQQYSLTIADGMILATGQQTTGDTRGLIRGAVTGGAFVAWRDRPAGLLLDCPDSRNLAYAIWKATHWGEQHIASMDVHAGGGNPVVIMHVGGGEFTFNNVGYFSTNGAMYAGGNGDFNDVYIRSDIRLKSNLVELKDALSKVEQLKGYIYDKKQKIEDEEPQHREAGIIAQDLQKVLPEAVRENEETGMLTISPSSVNALLITAINELRERLEAIERKIGA
Physico‐chemical
properties
protein length:822 AA
molecular weight: 88263,21220 Da
isoelectric point:5,83506
aromaticity:0,08029
hydropathy:-0,33613

Domains

Domains [InterPro]
DC_0505
ATT
1–355
DC_0505 IPR030392
DC_0139
STR
335–822
DC_0139
IPR030392
CHP
725–783
IPR030392 Coil
YP_008060785.1
1 822
Architecture
ATT
STR
ATT 1-355 | STR 356-822
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008060785.1
1 822
Domain Start End Length (AA) Confidence
N-terminal 1 364 364 0,1646
Central domain 365 563 200 0,2604
C-terminal 564 822 258 0,8455
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-364
Central
365-563
C-terminal
564-822

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Lw1
[NCBI] 		1307804 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus lw1
Host Escherichia coli BL21(DE3)
[NCBI] 		469008 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008060785.1 [NCBI]
Genbank nucleotide accession
NC_021344 [NCBI]
CDS location
range 169254 -> 171722
strand +
CDS
ATGGCAGATTTAAAAACGGGTACTACCATAGGCGGTAATACTATCTGGAGTCAGGCGAATTTACCCTTACTCACTAACGGAAACACATTAACGTATAAAGGCTTTAAAGTCTATACTGAAAACGACAAACCAACGAAAGCCGAAATCGGTCTGGGTAACGTAACAAACGATGCACAGGTTAAAAAGTCCGGCGATGAAATGACAGGAGATTTGACGTTAAAGAATAACTCGCAACTTACCGTCCCTCGCTGTATTAACCTGGTATCAGACACAACCAATTTAGCCCCTTGGTTATTAACGACTCGTTCAGATAATAACGCGGTTACAGATCCGTTTCCATCACAGCATACACGTACATTTACGTTGTTCATCAATACGAAGTCAAATACTTCTGATCCTGGTGGTGGCGCAAACCTTGCTGCTCTATTATCACATCAGGCAACTACTGGGGCTGGTTCTATCGAACTGCAAGCATACGATGCACCAAACAAGACAACTGGCGCTACGGGCATTCTACGCGCTCAGATTGGGCTTAATGGTTGGGATGGTTCAATTAACCTTGCCGGTGCTTCGTTAAACGTTGGAATGACAACGACAATTAACTCTAATTTATACGCGAATGAACTCATTTCGAAAGGGGCAGGAAACCGTAACGTAACTATGCAAGACACAAACGGCAACGAACTAGCTATGCTGTTTGCAGATACGGGTAAGAACCTGTATGTTCGTACTGGTGGTTCATATGTATCTCGTTTCGCTGCTGATGGCACTCTTATTCTGGCTAACGGCTTGACTGTTCCGCGTCAGGTATTTGTTAACGGTGCTTCACTTCCAGTGAACAATGGTCAAGTTCGACTTGATACAAGCGCTGATGGAAACGCTGTTGGTGACGGTGCAACGCATCTTGGTATGAAATTAGAAGATGGGAAATATTATCATTATTTCCGTGGTGCTGGTGTGATGTACATTGACATGAAAGGTGGAATATCTTCTTCAACCCCGTTGTATATGAATGGAGTTGATCAAGCAATACCTAAAGTTGAAATGCTATCTACTGGTGCTGCTGGTGCTAAAAACTTTTTGCGGCGGTTTCGTGGTGGTCTTCCTGATATTATATGGCATGAAACTGTTCAGGGTGGTGATTACCGATTAGCAATAGGGGATACCGATGCGGATTATCAGTTAAGAATTAGTGCTGATGGTGCTAATAGAGGTGGTTATGTATTTGGTGGTACGTTTACGGCTGATCGCGGTAATGATGGATTCAAGATCCGTTATAAACCTGATACTGAATCAGCAATGTTCCAGATCTGGAACAGGGATACATCAGTATTGAACTCTTATTTCGGATACGGGTCAAGTAATCAGGCAACAGTTAACCTGTATAACCGTTTAGGTGATATTGGCGTTTCTACTCCAAACGCGGCGTTCCGTCTGGATAATACTACGTTAACTCTTGGTAACTCTTCATCTGCGGAAGCCAGTCAACGTGCGTTTACTATCAGGAACTGGGGAAACAACTCGGCGGGTGGATACCGTGCTGCTGTACTTGAAGTTGGTGACGGCACAAGTTATCACTTTTATAGCCAACGCCGTTCTGATAACTTAGTCGAAATTGCATTTGTTGGCGATGCTTATGTCAATGGGACTACATTTCTACAGAATAACGCGCGTGTTCGTGGCAGTGACGGTATTTCTATCGAAGCGGATACAAACTGTCATGTGTGGTTTAGAACCGCTGGCGGTGCGGAAAAAGCAGTATTATATGCAGAGAATAACGGCAGCGTAAAACTTCGTACATCAAACCAGCAATATTCTCTTACGATCGCTGACGGCATGATCCTCGCTACTGGACAACAGACAACTGGAGACACTAGAGGGTTAATCCGTGGTGCTGTTACTGGTGGTGCGTTTGTCGCATGGCGCGATCGTCCTGCTGGTTTGCTGCTGGATTGTCCTGATTCACGAAATCTAGCATACGCTATTTGGAAAGCTACTCATTGGGGTGAACAACATATCGCATCAATGGATGTCCATGCGGGTGGCGGCAATCCAGTGGTAATTATGCACGTTGGTGGCGGTGAATTTACCTTTAACAACGTTGGTTACTTTAGCACTAACGGCGCTATGTATGCAGGTGGAAACGGCGATTTTAACGATGTCTATATTCGTTCTGATATCAGACTGAAATCTAACCTGGTTGAACTGAAAGATGCACTGAGTAAAGTTGAACAGCTTAAAGGTTATATCTATGATAAGAAACAGAAAATCGAAGATGAAGAACCACAGCATCGTGAAGCGGGTATTATTGCTCAGGATCTTCAAAAGGTTTTACCGGAAGCAGTAAGAGAAAACGAAGAAACCGGAATGTTGACGATCTCCCCGTCAAGTGTTAACGCGCTTCTGATTACGGCAATCAATGAATTGCGTGAACGTCTGGAAGCAATCGAACGGAAAATAGGGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
497fdeddcaafa4cbf94bc4005d46ff8c551b97e48590bb558ff99753e9bee372
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5433
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50