Protein

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Genbank accession
YP_009320943.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,84
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKTIQRAFLEVAKFSYRVGLSNDEFDAFSIMLYPAEYIVDNRPGEVLYTNVPPIDANSNLDITSSNNVLYKYNSVEGGVIVPRGCSLVGTDLRRTKIIPKYVPYPTTYPAKGINTENDVPPRTSIFKVTGGTYFWQFSFFDGAEEGVYYKPDSTDTLAPKFSHHRLTCFEFADGLNPLSTLISGGSVPNSDYTAVADIQQRTDLEIYYQKVSKAFAAIPDTSGDPDTDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINISGVTGSTGPSSEADAGVYNGSFTVTSASGNVFTYQMQQEPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHANGAKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDVATAGDGAHLDGFAEYRKGWGHEHIKCSNDSFIQAVSVFAVGYAGHFIAESGGDMSITNSNSNFGNTALRSAGFKAKAFSKDKAAEITHIIPPKALSVISTSATGTNATNTITLADDGSVNGVIQGMQVSGTGIAAGALVSSFNTNTRVITLSANNTGAVSGNVIFGQETSVNWVNIDIQRTKVINQALAGQGGTPGTRLYLYGYTVEASPPTTKVQGFTIGARQDGTGGSAVPDKLNCLLVANGASEATVQTAKISPYGPSVSGKAAGTVGSPLQYDSSTYTIGGVAGSVGGWYISVDSTDNDIYTAVNTNTQYNNVSFTPTTFIKRIADGRDLQDRTYRIRIKIDKDKTNPLPRDPISGYILQPLNSDTTSYNLSKAYYIYDIEIVQEFERGVADGIYYLTLLCASIAPSTSNFNDRKFSQNVNEVYPTFDRDNPLADPLAAVSVADNETIGLVNATDGATPTPAKDPKRSITKEAIKFLLADSGWTQAGTTPGWDAVNNELEDVELTARAGDEETRKISIRENNDGSVAPIPIEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQIKFSQSIKEEGGVSFYSGLNSNGDLFIGNQVINPVTGNITNEDIAQLNVIGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGLTSFTNNLTAKKITYNNQDGTVLKQTLLAPEDANGQPDFNNVTGYDTPGDGDLVYNINWSPGKSLGWIYYNGTWHEFGLTDTGDINISTFNNEQHIGLGVAADTNYRANVNGSVRVDGDLVVTGRGGVSAANYVTREYNGDGSQLTFAITTYAGGIKHTANSILVFLNGVAQVGGTDYTVDGNGANVVFASGSAPLSTDDIHIVEMPI
Physico‐chemical
properties
protein length:1320 AA
molecular weight: 141444,52900 Da
isoelectric point:4,77171
aromaticity:0,09242
hydropathy:-0,27000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009320943.1
1 1320
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,9684
Central domain 84 311 229 0,9622
C-terminal 312 1320 1008 0,2055
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-311
C-terminal
312-1320

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM22
[NCBI] 		1883365 Uroviricota > Caudoviricetes > Pantevenvirales > Alisovirus > Alisovirus socal22
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009320943.1 [NCBI]
Genbank nucleotide accession
NC_031903.1 [NCBI]
CDS location
range 23410 -> 27372
strand +
CDS
ATGGCTTTAACTAGACTAAAGAATATTATTACTTCCCGCACGGGAAGAATTATCTATGTCAATCCTGATGACTTTGATGCCTCTGATGCTATTGACAACAGGGGCAATTCTGCACTGAGACCCTTTAAGACTATTCAAAGAGCATTTCTTGAAGTTGCTAAATTCTCATATCGAGTAGGTCTGTCAAATGACGAATTTGATGCCTTCTCGATTATGCTGTATCCAGCAGAATATATCGTTGATAATCGTCCTGGTGAGGTTCTCTATACTAATGTTCCTCCCATCGACGCTAATTCAAACTTAGATATCACATCTTCAAACAATGTACTTTATAAGTACAATTCTGTTGAAGGTGGTGTAATTGTTCCTAGAGGTTGTTCTCTGGTTGGTACTGATCTTCGTAGAACGAAAATTATTCCGAAGTATGTTCCTTATCCTACAACATATCCTGCTAAGGGTATCAATACCGAAAATGATGTTCCCCCCCGTACTTCTATTTTCAAGGTAACTGGTGGTACATATTTCTGGCAATTCTCTTTCTTTGATGGTGCTGAGGAAGGTGTATATTATAAACCTGACAGCACAGATACTTTAGCACCCAAATTCTCCCACCATAGACTTACTTGTTTTGAGTTTGCTGATGGTTTGAATCCTCTGTCTACTTTGATTTCTGGTGGTTCAGTCCCTAATTCTGATTATACTGCTGTAGCAGATATTCAGCAGAGAACAGATTTAGAAATTTACTATCAAAAAGTATCAAAAGCATTTGCTGCAATTCCTGATACATCTGGCGATCCCGATACTGACCAGATTCAGGCAAGAGTAGAAGAAAATCGTATTGTTGGTCCTATTTCCGATGAGTACAGAGTCCTTCAGATCACAAGAAATGGTCAGACAGCAACGGCGGTCACTGTTGATGAGTTTGATAACCCCAGAGACCATGGATTTTCCGTTGGTGTTAACATTAACATTAGTGGAGTTACTGGATCAACTGGACCGTCATCCGAAGCGGATGCAGGAGTTTACAATGGGTCTTTCACAGTCACATCCGCATCTGGTAACGTCTTTACTTACCAAATGCAGCAAGAACCAACAGGAAATGCTGTAGGTTCTAACATCACAGTAAAAACTGAGATTGATACTGTTGACTCTGCATCACCATATGCATTTAACCTGTCACTAAGAAGTGTCTGGGGTATGAATGGTATGCACGCAAACGGTGCTAAGGCAACTGGTTTCAAATCAATGGTTGTTGCACAGTTTACTGGTCTATCTCTACAGAAAGATGATAGAGCGTTCGTAAGATATAATGCTTCTACTGGTAACTATGATGTAGCAACTGCTGGTGATGGTGCTCACTTAGATGGTTTTGCTGAGTATAGAAAAGGATGGGGTCATGAGCACATTAAGTGCAGTAATGACTCATTTATTCAGGCAGTTTCTGTGTTCGCTGTTGGATATGCTGGTCACTTCATTGCCGAAAGTGGTGGTGACATGTCGATTACCAACTCTAACTCAAACTTTGGTAATACTGCTCTAAGATCTGCTGGATTCAAAGCAAAAGCATTCTCTAAAGATAAAGCAGCAGAGATTACACATATCATTCCACCCAAAGCACTTAGTGTTATTTCAACCAGTGCTACTGGTACTAACGCTACAAATACTATTACTCTAGCAGACGATGGTTCTGTGAATGGTGTTATTCAGGGTATGCAGGTAAGTGGAACTGGTATTGCTGCTGGTGCATTAGTTTCATCTTTCAATACAAATACTAGAGTAATTACCCTTTCTGCTAATAACACTGGTGCTGTTAGTGGTAATGTTATTTTTGGACAAGAAACTTCTGTTAACTGGGTCAATATTGATATTCAGAGGACAAAAGTAATTAACCAAGCACTTGCTGGTCAAGGTGGAACTCCTGGTACGAGATTATATCTTTATGGTTACACTGTAGAGGCATCTCCACCAACAACTAAAGTACAAGGTTTTACTATCGGTGCAAGACAAGATGGAACTGGTGGTAGTGCTGTACCTGACAAACTAAATTGTTTATTGGTTGCAAATGGTGCTAGTGAAGCAACTGTTCAAACTGCAAAGATTTCTCCTTATGGACCTTCTGTTTCGGGTAAAGCAGCAGGCACAGTAGGATCTCCATTGCAATATGATTCCAGTACATATACAATTGGTGGTGTTGCTGGATCTGTTGGTGGTTGGTATATTTCTGTAGATTCTACTGATAACGACATTTATACAGCAGTTAATACAAACACACAATACAATAATGTAAGTTTTACTCCTACAACTTTCATTAAGAGGATTGCTGACGGCAGAGACTTACAAGATAGAACATATCGTATTCGCATCAAAATTGATAAAGATAAGACTAATCCTTTGCCTCGTGATCCTATCAGTGGTTACATTTTACAACCTCTGAATAGTGATACTACATCATATAATTTGAGTAAGGCATATTACATCTATGATATTGAGATTGTTCAAGAGTTCGAGAGAGGTGTTGCGGATGGAATCTACTACCTTACCCTGCTTTGTGCATCTATTGCACCTAGCACTTCTAACTTCAACGACAGAAAGTTCAGTCAAAATGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTCTTGCTGACCCTCTTGCTGCGGTATCCGTCGCTGACAATGAAACTATCGGTCTTGTAAATGCAACCGATGGTGCTACACCTACACCAGCAAAAGATCCTAAGCGTTCTATTACTAAAGAAGCAATTAAATTCTTACTTGCAGATAGTGGTTGGACACAAGCGGGTACAACTCCTGGATGGGACGCTGTTAATAATGAACTTGAAGATGTTGAATTGACTGCTCGTGCTGGTGATGAAGAAACCAGAAAGATTTCTATCAGAGAGAATAATGATGGTTCTGTAGCACCAATTCCCATTGAATTTAGACGCCACTCGATTCTTAGATCTGGTAATCATACATTTGAATATCTTGGTTTCGGTCCTGGTAACTACTCAACTGCATTCCCTCAAACACAGGTAGAGACATTATCTGCTGATCAGATTAAGTTCTCTCAATCTATTAAAGAAGAGGGTGGGGTTTCTTTCTATTCTGGTTTGAACTCTAACGGCGACCTGTTTATTGGTAATCAGGTTATTAACCCTGTTACTGGTAATATCACAAATGAAGATATTGCACAGTTAAATGTTATTGGTGAAGAAAATACAACCATTGAAACATTCTCTGAGTTGGTTCTTACCGATAAACTGACTGTTATTGGTGGTGCATCTAACCAGTTAGAATCTATTTTTGCTGGTCCTGTTACATTCCAAGGTTTAACATCCTTCACAAATAATCTTACTGCTAAGAAGATTACATATAACAATCAGGATGGTACGGTTCTAAAGCAAACTTTATTAGCACCCGAAGATGCCAATGGACAACCCGACTTTAATAATGTCACAGGATACGATACGCCTGGTGATGGTGATCTTGTTTATAACATTAACTGGTCACCTGGCAAGTCGCTTGGTTGGATTTATTACAATGGAACGTGGCACGAGTTTGGTCTCACAGATACTGGTGACATTAATATCTCTACTTTCAATAACGAGCAACATATTGGTCTTGGCGTTGCTGCTGACACTAATTACAGGGCGAATGTAAATGGTAGTGTTAGAGTTGATGGTGACTTAGTTGTTACTGGTCGTGGTGGTGTTTCTGCTGCCAACTATGTTACTAGAGAATATAATGGTGATGGATCTCAATTAACATTTGCTATCACAACATATGCTGGTGGTATTAAACATACTGCAAACTCAATTCTTGTGTTCTTGAATGGTGTTGCACAGGTTGGTGGAACTGACTATACAGTTGATGGTAATGGTGCAAATGTTGTATTTGCATCTGGTTCTGCACCACTCTCAACTGATGATATTCATATTGTAGAAATGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c2c8627611123b8f9e75691fc98e8f9210df11484965e6bad7c54e8fafca75b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3802
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50