Protein

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Genbank accession
AUR99044.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MLRVVGTIVPPVEGGVLEHVTMLVQCIKSSVITLENSFSPVTCDDTGGYDFILREGIYRIYIKYSTNTPTISLGTCGVVEGMPAELDLNNLLTNYTPQVPDYIQELDDKWEDTWQDFINDNNTQHANINNSVSAGDAKVVEDMSVYINEVTGQQGASLREEISAGDAGVYNESRAYTDSLGVQVALDITQVANDVSTVSQQLTAYKDENGNTFDEIDNRITTNENELSSTISAQVESETGAMQLRIEDLITTGNAEISQSISVIEDALGATQAAWQIVATVDDLTSAIGMTNNGVNSEIFMQANALKFVDPSDPTLATDPVFQIENQEVFMRSAFIKELGATTVTTDELTSTNYDSNTGFKLHASGLAEFQNINAKGHINATSGSFKGHLEATSGYINNLTANNVTIQEDCTILGTTTAKNLIGDVSSGSIKSFTERYISSGGTNSTNLASFSVDNTLSGRNCLVTFSGITCDVSASNNADTDQTVYVEFRIMEGNTVRRSALMKLYVKQRAPTYPTTASGVVALPTIGYVFGQLSKTLTANVYIHTSNASTSGGATIFAGTVTCMKLRQDGTVT
Physico‐chemical
properties
protein length:575 AA
molecular weight: 61743,65890 Da
isoelectric point:4,32519
aromaticity:0,06783
hydropathy:-0,15530

Domains

Domains [InterPro]
DC_1904
RBD
67–565
DC_1904
IPR015406
RBD
257–385
IPR015406
AUR99044.1
1 575
Architecture
RBD
RBD 67-565 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR99044.1
1 575
Domain Start End Length (AA) Confidence
N-terminal 1 387 387 0,9113
Central domain 388 564 178 0,0295
C-terminal 565 575 10 0,9968
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-387
Central
388-564
C-terminal
565-575

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.261.O._10N.286.51.A7
[NCBI] 		1881237 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99044.1 [NCBI]
Genbank nucleotide accession
MG592625.1 [NCBI]
CDS location
range 26240 -> 27967
strand +
CDS
ATGTTACGTGTTGTAGGGACAATAGTTCCACCAGTGGAAGGGGGAGTGCTAGAGCATGTGACCATGCTTGTCCAATGTATCAAATCTAGCGTTATCACTCTTGAAAACAGTTTCTCTCCCGTTACCTGTGATGACACAGGAGGCTATGACTTTATCCTCCGTGAAGGTATCTATCGAATCTATATTAAATACTCCACTAACACCCCAACTATTTCCTTGGGTACGTGTGGTGTAGTTGAAGGTATGCCTGCTGAGCTTGACCTGAATAACCTCCTAACCAATTACACTCCACAAGTCCCTGACTATATCCAAGAGTTAGATGATAAATGGGAAGATACTTGGCAAGATTTCATTAATGACAACAATACTCAACATGCCAACATAAATAACTCTGTATCGGCAGGTGACGCTAAAGTTGTTGAAGACATGAGTGTTTACATCAATGAAGTCACAGGACAGCAAGGAGCGTCTCTCAGGGAGGAAATATCAGCAGGTGATGCAGGTGTTTACAATGAGAGCAGAGCGTATACCGATTCATTAGGCGTACAAGTTGCTCTGGATATCACGCAAGTAGCTAATGATGTGTCTACGGTATCTCAACAACTTACAGCATACAAAGATGAGAATGGTAACACCTTTGATGAGATTGATAACCGTATCACTACTAATGAGAATGAGCTTAGTTCTACCATTTCTGCTCAAGTAGAATCAGAGACAGGAGCAATGCAGTTACGCATTGAAGATTTGATTACCACTGGCAATGCCGAAATTTCTCAAAGCATCTCTGTTATTGAAGATGCCCTAGGGGCAACTCAAGCAGCATGGCAAATCGTAGCTACGGTAGATGACCTAACCTCTGCAATTGGTATGACGAATAATGGGGTTAACTCTGAAATCTTCATGCAAGCAAATGCTCTGAAGTTTGTTGACCCTAGTGACCCTACCTTGGCTACTGACCCTGTATTCCAGATTGAGAACCAAGAAGTCTTCATGCGAAGTGCTTTTATCAAGGAGCTTGGGGCAACTACAGTTACGACAGATGAGTTAACCTCTACCAATTATGACAGTAACACAGGTTTCAAACTCCACGCTTCAGGGCTTGCAGAGTTTCAGAACATAAATGCCAAAGGACATATTAATGCTACTAGTGGTAGTTTTAAGGGACACCTAGAGGCAACCAGTGGGTACATAAATAACCTAACCGCTAATAATGTCACCATTCAAGAAGACTGTACGATTCTGGGTACCACTACCGCTAAGAATCTCATAGGGGATGTATCTTCAGGGTCTATTAAATCATTTACTGAAAGGTATATATCTTCAGGGGGAACCAACAGTACTAACCTTGCTTCCTTTAGTGTAGATAACACCTTATCAGGTAGAAACTGTTTAGTGACCTTTTCAGGAATCACCTGTGATGTATCTGCATCAAATAATGCCGATACTGACCAAACGGTCTATGTAGAGTTTCGTATAATGGAAGGGAACACAGTAAGACGTTCTGCTTTAATGAAACTTTACGTAAAACAACGCGCACCTACGTATCCCACGACAGCAAGTGGGGTAGTAGCATTACCTACTATAGGGTATGTATTTGGTCAATTGAGTAAAACTCTGACAGCAAATGTGTATATCCATACAAGTAACGCAAGTACCTCAGGTGGTGCAACTATTTTTGCAGGTACAGTAACATGTATGAAACTTAGACAAGATGGCACTGTAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a224d698d71ab2833301c2acee14f930d4c13039e608ad5bdb7a01434bafb95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6485
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank