Protein

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Genbank accession
QXO12241.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIISNLRQKSNYRIQKFIAGSSHIAVLGTNGQLYTRGNNQYGQLGDTTYSTDYNNWVLSMSNVSSIYGDRSENTIAIKNDGTLWVCGRFTSAVQFGFSSTVGAHSWVEITSSIPFSVSLIKDIIVGYQMSAILRSDGLVYFCGTNSYGQFGRNNTTNLSVYTVSLATDVQKLYVQHPVGSVQNVISYLDSSSHIWACGYNGSKQVSFSNTSSFSTFQQMSTTIVCSAVAIAGTTSWYLNGANNVGLFCGNAVDLQGSNSGILNLYSATGNQSSGLTDIQLASSGGVVYGRKSTGQFFAKTLFGGGGTVTPLMNNVSNRANWLQQHTLPVSTATYSGMAMGNNNNAFLLYLGADYQEIWGLGLMFPQNDSVYRPLVIPDFN
Physico‐chemical
properties
protein length:384 AA
molecular weight: 41474,88160 Da
isoelectric point:8,18744
aromaticity:0,11719
hydropathy:-0,03281

Domains

Domains [InterPro]
IPR009091
STR
3–243
IPR009091 DC_1531
IPR009091
STR
3–245
IPR009091
IPR009091
STR
15–246
IPR009091
IPR051553
Unmapped
17–215
IPR051553
IPR000408
STR
21–37
IPR000408 IPR000408 IPR000408
PF13540
STR
23–47
PF13540
QXO12241.1
1 384
Architecture
STR
RBD
STR 3-246 | RBD 263-384
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO12241.1
1 384
Domain Start End Length (AA) Confidence
N-terminal 1 288 288 0,0452
Central domain 289 373 86 0,4857
C-terminal 374 384 10 0,5004
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-288
Central
289-373
C-terminal
374-384

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_44
[NCBI] 		2859282 No lineage information
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO12241.1 [NCBI]
Genbank nucleotide accession
MW879343 [NCBI]
CDS location
range 351084 -> 352238
strand -
CDS
ATGTTACCATTTCCAATCATAAGTAATTTACGTCAAAAAAGTAATTACAGAATTCAAAAGTTTATAGCTGGTTCATCCCACATTGCAGTACTTGGAACAAATGGACAATTATATACTAGAGGCAATAACCAGTACGGACAACTTGGTGATACTACGTACAGTACAGATTATAACAATTGGGTACTTAGTATGTCAAACGTATCATCGATATATGGGGATCGTTCTGAAAATACGATAGCAATTAAAAATGATGGTACATTATGGGTATGTGGTAGATTTACGTCAGCCGTACAATTTGGGTTCAGTAGTACAGTTGGTGCACATTCATGGGTAGAAATCACATCTAGCATACCATTTAGCGTATCATTAATCAAGGATATTATTGTTGGGTATCAGATGAGTGCGATTTTACGGTCTGATGGATTAGTATATTTTTGTGGTACAAATTCATATGGTCAGTTCGGTAGAAATAACACAACGAACTTATCTGTTTATACTGTCTCATTAGCCACTGATGTTCAGAAACTATATGTTCAACATCCAGTTGGATCTGTTCAGAATGTTATTTCTTACTTAGATAGTTCTTCACATATATGGGCATGTGGATATAATGGTTCTAAGCAGGTTAGTTTTTCTAATACATCATCATTTAGTACTTTTCAACAAATGAGTACGACTATAGTATGTAGTGCAGTGGCTATTGCAGGGACAACATCTTGGTATTTAAACGGTGCTAATAATGTTGGATTATTTTGTGGTAATGCTGTAGATTTACAGGGATCAAATAGTGGTATATTAAACTTATATAGTGCCACTGGAAATCAAAGTTCAGGTCTAACTGATATTCAATTAGCATCAAGTGGAGGAGTTGTTTATGGAAGAAAGAGTACTGGTCAATTCTTTGCTAAGACATTATTTGGTGGTGGTGGTACTGTAACACCATTAATGAACAATGTATCTAACCGAGCTAATTGGTTACAACAACATACATTACCAGTCAGTACTGCGACATATTCAGGAATGGCAATGGGAAATAACAATAATGCATTCTTATTGTACTTAGGTGCAGATTATCAAGAGATATGGGGTTTAGGATTAATGTTTCCACAAAATGATAGTGTTTATAGGCCATTAGTAATACCAGATTTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d62e7d934425b90a5b463dd3cc912b9d09f1f6667771753ffeef8c12627c08b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7610
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_44 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank