Protein

View in Explore

Genbank accession

WJN63764.1 [GenBank]

Protein name

tail fiber

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,67

Protein sequence

MASRKEMMGMDTETLRMLGLEAGLSFEPGLSKSKMVIQLETHQASGWLDVNSQLLHADAEGGFDHMQGFTGHEEQSISDAARVAQSLAGAGYTETFHSIMGGGRDHHVDALHQYMQKLGVSADDVWMHMPKANPNIPPQNFNMLKGYLNNHWDDYQDIMPPLEGHYAGDIMGEYSTNKGNVADSYNHLASMYLNKAAYNNPHAYEHDAALVATRLASAMGNQFLEVGYAAATGAKVGYHSILPQLGSDVVRGTQYPREPLNAAGLPLGATGSAVQGNRAHYSLVASLLGRPEGADEASSAIRQEVSSTMKSLASSYKGGGETGMNPYRHETSEHDLLLDSATRYVGIEEARSGYANLDDTSYNRNNIQAVIENSWDKMDAQAASAPSGVPNPDLRLPRRAEIGTQWSADLNEPLSWNSARSRRESIAIADLDAAHANFRDVADGSRGSSPVHFHNMEQGSDEWFKFREQYDITGSTVGGFLGSNSYTRPWAQFLDKLGVTRKDTAPNEFQEKMFAMGHQRENEARIRVSKQLGQDIQQVGAITNDMYPGMMYSPDGLIGDDALWEHKAPERAGKFADLSAGEHPDYMDQIQMGMLLSGRKKTLFSQTIGQETRNQWIDQDPDWYSKNQARLDSVLNRMQAGRDFLSNHADLPQDELKAGVRKAVTGEGIWKDVRQKSDRGYSPNAGTEADPFLIGGRRSYNDAAQGGSDYEPNFVTSANTGLVPVGGNGAETGMALAVKQGVLAAREEVKRGEASGNAAGFDAGGADADFDDLGMPRGFSRKAFDRANSDGAGGGGGDGGRRNAAGPGAFDNFGNGIASGLASGSLHGLQGGFQRELANMGPVGQTLLAGIGAASIGGEVISTMNDYLGNAQDFGSSNPIQFDAQQQGMEMLGLNKAQAQRANETVHSAFNMMANGDPSAAAQMSVATRGLITLADIRESGGDPIKLNRIFVERARSRGWSQERIAGAAQMAGLDGFARTASTSDRIRNAAEGLDDTRGRQDTSEFAGAVREDNATRAAVSPDYFVQRYGAQDYNALVGGLSGGMSKAYQLMDKAEQVTHAKSLAEATQMLESGGRDYDDKGNPLTSSTGAKYSMQVLPSTARDPGYGVKPAQSDTPEEYNRVGRELLDKMVGKYAGDYDKAAAAYTDGAGTVDRAVKQWGNDWLKHMPAQAQKRVADLHKLATGANGFAGGSTGPSVGTIQVNVTATVNGKQATATANVGNQSQSHTINVGGAVSQKR

Physico‐chemical properties

protein length:	1239 AA
molecular weight:	132648,81380 Da
isoelectric point:	5,41496
aromaticity:	0,07183
hydropathy:	-0,57805

Domains

Domains [InterPro]

DC_0169
ATT
1–417

DC_0169 IPR011604 DC_0159 IPR023346 DC_0800

IPR051703
Unmapped
362–602

IPR051703 G3DSA:1.10.530.10

IPR011335
Unmapped
454–638

IPR011335 cd00254

IPR019080
STR
462–599

IPR019080 IPR008258

WJN63764.1

1 1239

Architecture

ATT

STR

RBD

ATT 1-417 | STR 444-1163 | RBD 1164-1239

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0169	ATT	DC_0169	1	417	Novel HMM	DC_0169	N-terminal	Low	Positional only	46 proteins / 46 hits
IPR051703	Unmapped	-	362	602	InterPro	NF-kappa-B Signaling Regulator	-	-	-	-
IPR011604	STR	IPR011604	444	646	Merged direct domain	PD-(D/E)XK endonuclease-like domain superfamily	Central	Low	Positional only	46 proteins / 46 hits
IPR011335	Unmapped	-	454	638	InterPro	Restriction endonuclease type II-like	-	-	-	-
IPR019080	STR	DC_0765	462	599	InterPro cluster	YqaJ viral recombinase	Central	Low	Positional only	44 proteins / 44 hits
DC_0159	STR	DC_0159	646	1059	Novel HMM	DC_0159	Central	Low	Positional only	48 proteins / 48 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	1050	1182	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR023346	STR	IPR023346	1062	1163	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
cd00254	ENZ	DC_0010	1072	1159	InterPro cluster	cd00254	C-terminal	High	Text match	100 proteins / 142 hits
IPR008258	ENZ	DC_0010	1086	1160	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits
DC_0800	RBD	DC_0800	1183	1239	Novel HMM	DC_0800	C-terminal	Low	Positional only	42 proteins / 42 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage Berlingot [NCBI]	3056491	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Erwinia amylovora [NCBI]	552	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

WJN63764.1 [NCBI]

Genbank nucleotide accession

OQ818695.1 [NCBI]

CDS location

range 27658 -> 31377
strand +

CDS

ATGGCTAGCAGAAAAGAAATGATGGGCATGGATACGGAAACTCTCCGTATGCTTGGTCTTGAGGCCGGATTATCTTTTGAGCCCGGACTCTCGAAGTCCAAAATGGTTATACAACTGGAGACTCATCAAGCTTCCGGTTGGTTAGATGTGAACAGCCAACTTCTTCATGCAGATGCGGAAGGCGGCTTTGACCACATGCAGGGCTTTACAGGTCACGAAGAACAATCCATTTCTGACGCTGCAAGAGTTGCACAATCGTTGGCTGGTGCTGGTTACACTGAAACATTCCACTCCATTATGGGTGGCGGTCGTGACCATCATGTTGATGCCCTTCATCAATACATGCAGAAACTTGGTGTCTCTGCTGATGATGTTTGGATGCACATGCCAAAGGCGAATCCCAATATTCCGCCTCAGAATTTCAACATGCTGAAAGGTTATTTAAATAACCATTGGGATGATTATCAGGATATTATGCCTCCACTTGAAGGGCATTATGCTGGTGATATCATGGGCGAGTATTCTACGAATAAAGGCAACGTTGCTGATTCGTACAATCATCTTGCATCCATGTATTTAAATAAAGCTGCTTACAACAATCCTCACGCATATGAACATGATGCTGCGCTTGTTGCAACGCGTTTGGCTTCGGCAATGGGAAATCAATTCCTCGAAGTTGGTTATGCTGCTGCAACTGGTGCGAAGGTTGGATATCATTCTATTCTTCCGCAACTTGGCTCTGATGTTGTTCGTGGTACTCAGTATCCTCGCGAACCTCTGAATGCTGCTGGTTTACCTTTGGGTGCAACTGGTTCTGCTGTTCAGGGCAACCGCGCACATTATTCTTTGGTTGCTTCTTTGCTCGGTCGTCCAGAAGGTGCTGATGAAGCATCGAGTGCGATTCGTCAGGAAGTAAGCTCAACAATGAAGTCTCTGGCATCGTCTTATAAAGGCGGTGGTGAAACAGGAATGAATCCTTATCGCCACGAAACGTCAGAGCATGACTTATTGCTGGATAGTGCGACACGTTATGTTGGTATCGAAGAAGCTCGTTCAGGTTATGCAAACTTGGATGACACCTCATACAATCGCAACAACATTCAGGCAGTAATCGAAAACAGCTGGGACAAGATGGATGCTCAGGCAGCGTCTGCACCATCTGGTGTTCCCAATCCAGACCTTCGTTTACCACGTCGTGCGGAGATTGGTACTCAATGGAGTGCTGATTTAAACGAACCATTGTCTTGGAACTCTGCTCGTTCTCGTAGAGAGAGCATTGCAATTGCAGATTTGGATGCTGCTCATGCAAACTTTCGTGATGTTGCTGATGGAAGTCGTGGTTCAAGCCCTGTTCACTTCCACAACATGGAACAAGGAAGTGATGAATGGTTCAAGTTCCGTGAACAATATGATATTACCGGCTCAACAGTTGGTGGTTTCTTAGGTTCAAACAGCTACACCCGTCCGTGGGCACAGTTCTTGGACAAACTTGGGGTCACTCGTAAGGACACAGCGCCAAACGAATTCCAAGAAAAGATGTTTGCCATGGGACACCAGCGAGAAAATGAAGCTCGCATTCGTGTTTCCAAACAACTCGGTCAGGATATCCAGCAAGTTGGTGCAATAACCAACGACATGTATCCCGGAATGATGTATTCACCAGATGGATTGATTGGTGATGACGCATTGTGGGAGCATAAAGCCCCTGAACGTGCTGGCAAGTTTGCGGATTTAAGTGCTGGCGAACATCCAGACTACATGGACCAGATTCAAATGGGCATGTTGTTATCTGGACGCAAGAAAACTTTATTCTCACAGACGATTGGACAAGAAACTCGCAACCAATGGATTGACCAAGACCCGGATTGGTACAGTAAGAACCAAGCTCGTTTGGATTCTGTGCTCAACCGTATGCAAGCTGGTCGTGACTTCCTCTCGAATCATGCTGACCTTCCTCAAGATGAATTGAAAGCCGGTGTTCGTAAAGCTGTAACAGGCGAAGGAATCTGGAAAGATGTTCGTCAGAAGTCGGACCGTGGTTACTCGCCAAATGCTGGTACAGAAGCTGACCCATTCTTAATAGGCGGTCGTCGTTCTTATAATGACGCTGCTCAAGGTGGCTCAGATTACGAACCGAACTTTGTGACTAGTGCCAATACTGGCCTCGTTCCAGTGGGCGGTAACGGCGCTGAGACGGGCATGGCGCTTGCGGTTAAGCAAGGCGTACTGGCGGCAAGGGAAGAGGTAAAACGCGGCGAGGCTTCGGGTAACGCAGCAGGATTTGATGCTGGCGGTGCCGATGCGGACTTTGACGATTTGGGTATGCCTCGCGGCTTCTCACGTAAGGCGTTCGACCGGGCAAACAGTGACGGCGCTGGCGGAGGTGGTGGAGACGGCGGTAGACGCAATGCCGCTGGCCCAGGCGCGTTTGACAACTTCGGCAATGGGATTGCATCGGGTTTGGCAAGCGGCTCACTGCATGGCCTACAGGGAGGATTCCAGCGTGAACTAGCAAACATGGGGCCGGTTGGTCAAACTCTGTTGGCTGGTATCGGAGCGGCGTCAATTGGTGGTGAAGTCATTTCAACAATGAATGACTATCTTGGAAATGCTCAGGACTTTGGTTCAAGCAATCCAATTCAATTTGACGCTCAACAGCAAGGCATGGAAATGCTTGGGCTTAACAAGGCTCAGGCTCAACGTGCAAATGAAACAGTTCACTCTGCTTTCAACATGATGGCGAATGGCGACCCAAGTGCTGCCGCTCAAATGTCTGTTGCAACTCGTGGACTTATCACGCTTGCTGATATCCGTGAAAGCGGTGGCGACCCAATCAAGTTAAACCGCATCTTTGTTGAACGTGCCCGTTCTCGTGGCTGGAGTCAGGAAAGAATTGCTGGTGCTGCTCAAATGGCAGGACTTGATGGATTTGCTCGCACTGCCTCAACTTCTGACCGAATCCGAAATGCTGCGGAAGGTCTTGATGACACTCGTGGTCGTCAGGATACTTCTGAGTTTGCTGGTGCTGTTCGTGAAGACAATGCAACTCGTGCTGCTGTATCTCCTGACTATTTCGTTCAACGTTATGGTGCTCAGGATTACAACGCATTGGTTGGTGGTTTGTCTGGTGGTATGTCAAAAGCATATCAACTCATGGACAAAGCCGAACAAGTTACTCATGCCAAATCTCTTGCAGAAGCGACACAAATGCTTGAGTCTGGTGGCCGTGATTACGATGATAAGGGTAATCCTTTAACAAGTTCTACCGGTGCCAAGTATTCAATGCAGGTTCTTCCTTCTACTGCACGTGACCCAGGATATGGAGTCAAGCCTGCTCAAAGTGATACACCAGAAGAATACAATCGTGTTGGTCGGGAACTTCTCGATAAGATGGTTGGTAAGTATGCTGGTGATTATGACAAAGCGGCTGCTGCATATACTGACGGTGCTGGCACTGTAGACAGAGCGGTTAAGCAATGGGGCAATGACTGGCTTAAACATATGCCAGCACAGGCTCAGAAACGTGTTGCTGATTTGCATAAACTGGCAACTGGTGCAAATGGATTTGCTGGTGGCTCTACTGGCCCATCTGTTGGAACTATCCAAGTTAATGTCACTGCGACTGTTAATGGTAAGCAAGCAACTGCAACTGCAAATGTCGGCAATCAATCTCAGTCTCATACTATTAATGTGGGTGGCGCTGTTTCTCAGAAGCGTTAA

Genome Context

Tertiary structure

PDB ID

d33eb679ce96f9fc30f95fae3534377cbb240dd61d5ef582d9bf4e798f675e87

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,4616

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence