Protein

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Genbank accession
YP_009100427.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGFSTNEISKLSAKVLAAGVIDSLPTANWYESRFPNSFLVDPDNILNDIGVLRDFPASSAAAALAAVSANSTTMQSLGFNPDASFDPNTAVRLTPVAGTNRATYVAYATFNDPTSKQLKNWIQPQLIQQPSGAASNGYSIRVFVGGAPTAGGVELTTTVGLDIGGEVGWFFNYANGLLLFSTDVRPPSGFVGSDEIWVCGFRYVGETGGGGETIPEYTEVYLGQDIKAGDKFSNYGGVIAVRDHVGVWPMDIFSGVWNRIGDDRTFRFEGTDQEKLTRLLPSYEQDNNPIAIPDTAAIYTQGVQAPDVFITANKAEPTNNSVWSTGDDVNQIVPRYRIYCYVGNNVPLNGFVYQNAGDTPTGVKDIVVYVSDVEPSQRHADSTNLTEVFVGTMNARASNVDQRDVISFDQDYTGSWVTIDTFSNHGDPDFIGLNWVEFFSGNYYISTVMPTVGAFTKYNPVWGDNLNEQGVVILNSANTGHGATEWAFSEANKFNTLHDSEYNVLTDSNGALIVFNRSPRDVDTLVFPIGYSRPADEISEIERTQYLGKHVRHTNIYPPITGSDTLSFYEEFFFEVDDETPSEVTLTIHPRGRPTLTSHTITLRAYGSSRLNTPSDFDIITFNSLPEGSYRLHRDIEELRLGRGTTWLLEIII
Physico‐chemical
properties
protein length:653 AA
molecular weight: 71730,46150 Da
isoelectric point:4,52287
aromaticity:0,11485
hydropathy:-0,24349

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009100427.1
1 653
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,3759
Central domain 217 415 200 0,6339
C-terminal 416 653 237 0,1600
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-415
C-terminal
416-653

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella sp. phage 1/4
[NCBI] 		1458859 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella sp.
[NCBI] 		50422 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales
Host Shewanella sp. 4
[NCBI] 		1386772 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Shewanellaceae > Shewanella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009100427.1 [NCBI]
Genbank nucleotide accession
NC_025436 [NCBI]
CDS location
range 67612 -> 69573
strand +
CDS
ATGGGCTTTAGTACTAATGAAATTTCAAAACTAAGTGCAAAGGTGTTGGCAGCGGGGGTTATCGACTCACTACCTACAGCTAATTGGTATGAGAGTAGATTCCCTAACTCTTTCTTAGTAGATCCAGACAATATTTTAAATGATATAGGCGTTTTGCGGGATTTCCCTGCATCCAGTGCAGCAGCAGCATTAGCGGCAGTTAGTGCTAACTCCACAACTATGCAGTCTTTGGGTTTTAACCCTGACGCATCTTTTGACCCGAATACTGCGGTTAGGTTAACCCCCGTAGCAGGTACAAACAGAGCTACTTATGTAGCTTATGCAACATTCAACGATCCTACCTCTAAGCAACTTAAGAACTGGATTCAACCTCAGTTAATACAACAACCATCAGGAGCTGCATCTAACGGGTATTCTATTCGGGTATTTGTCGGAGGTGCTCCTACTGCAGGAGGTGTTGAACTTACAACTACGGTAGGTTTGGATATTGGTGGTGAAGTTGGTTGGTTCTTTAATTACGCTAACGGGTTACTACTATTCTCTACAGACGTAAGACCTCCTAGTGGGTTTGTAGGTTCAGATGAGATATGGGTTTGTGGTTTTCGTTATGTAGGTGAAACTGGTGGAGGCGGAGAAACCATACCAGAATATACGGAAGTGTATTTAGGACAGGATATTAAAGCTGGGGATAAGTTCTCCAATTACGGAGGAGTTATCGCTGTTAGGGACCACGTAGGTGTTTGGCCTATGGATATATTCTCGGGGGTGTGGAATAGGATCGGGGATGACAGGACTTTTCGTTTTGAAGGTACAGACCAAGAGAAACTAACCAGACTGCTTCCATCTTATGAACAAGATAATAACCCTATAGCAATACCTGATACCGCTGCTATATACACACAAGGGGTACAGGCACCTGATGTGTTTATTACTGCAAACAAGGCAGAGCCTACTAATAACTCTGTATGGTCTACTGGGGATGACGTAAATCAAATAGTACCTAGATACCGTATATATTGTTATGTAGGTAATAATGTACCTCTGAATGGGTTTGTTTATCAAAACGCAGGAGACACTCCTACAGGCGTTAAGGATATAGTGGTCTATGTTAGTGATGTAGAACCTTCACAGAGACATGCTGATTCTACTAACCTTACTGAAGTATTTGTAGGTACTATGAATGCCAGAGCCTCGAATGTAGACCAGAGAGATGTTATCAGTTTTGATCAAGATTATACTGGTTCTTGGGTAACGATAGATACATTCTCTAATCATGGCGATCCAGACTTTATTGGATTAAACTGGGTAGAGTTTTTCAGTGGTAATTACTACATATCTACAGTGATGCCTACAGTGGGAGCCTTCACAAAATACAACCCTGTATGGGGTGATAATCTAAACGAACAAGGTGTTGTAATACTTAATTCCGCTAATACGGGACATGGCGCTACAGAGTGGGCTTTCTCAGAGGCTAATAAATTCAACACACTACACGACTCAGAGTACAACGTACTTACAGACAGTAATGGTGCACTGATAGTGTTTAATAGATCACCTAGGGATGTAGATACTTTAGTTTTTCCTATAGGTTACTCAAGACCAGCAGATGAAATTTCTGAAATAGAAAGGACGCAGTATTTAGGTAAGCATGTACGCCACACTAATATATACCCTCCGATTACAGGGTCTGATACATTGAGTTTTTACGAAGAGTTCTTCTTCGAGGTTGACGATGAAACCCCTTCTGAGGTAACTCTTACCATACATCCAAGGGGTCGTCCGACTTTAACATCCCACACAATAACCTTAAGAGCTTACGGTAGTTCTAGATTAAATACCCCCAGTGATTTCGATATTATTACCTTTAATTCTTTGCCAGAAGGTAGTTATAGGTTACACAGGGATATAGAAGAATTAAGATTAGGTCGAGGTACTACTTGGCTTTTAGAAATAATAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4eebac25bc94de8c29fd30c6498c0a1be74b91019955913d82e897adddadea10
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4034
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50