Protein

View in Explore
Genbank accession
YP_009056444.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MALTAGQITLTNLNDAKQYILYLNGNVRTQIFDPNKGTYTPNFTSNNLRITPELYVSGGDGTNLLPSASVKSLKWYEGTQTDTPLAETDAGTTPSGLAYSLTTDPATAAAKTLVIKSNLANQTNQIFTCVVTYTETLTNFDIIVKASFEVIKVDSGISGADAYFINLWTPKGDTIRNSAGRVEIQADMYKGSDKVTPTAFKWYIQNADATPENLGDADGGDGWELLTSSNNHGVTGYTTSKISVPAGAIDGVKGFRCIATAPTTGVKYSGVVIARDFQDPIMADILGSSVYKNGVGSVEFTAQLTQNGTIISTSDFNFAWALYKSDGELVKKYTSVTGDKVTVPSADVKGTSNLIVDVSKKAVQGRIVSSGQKTLVNLNDIATSPTPPENPTDGMIWVNTSQEPFKFYIYREISGEWEQTGPLNLSQLDPDADQQVKDAYNGITDLDSDSKLTRYERSVVRAEIANIVGRFLESNESMPTLEEIDASQLGQAYAIRKAASDIGVSSINEFFVNFGNAYSALRTYLGDLTPKPWDIDTANSLTIDSATWDDAWNNYKLRYHLLNTEIQKRQQQYADQVGEGAVRDAIRAVSSTGEFETAPITSSSNIVIIDSPLASVGLPEFHGRHYDGWIANGVDPANPPNEWVSNGNRIVPVTNPSFLGQGVLTVYGKFYGQGDYYDNIKWEDNGELTKEKRWEDKLIDESYEWELAADKEGFKSLVSRSFADDVIGATVTGVKSTGELLTTTTEITTIDQAQLNSDGHLYISVADNDTGWGETYNPTPEEMKAYFLGWKMCNGTFGSNYSGTGTKTWHPLKDTDLSRAVTVVPSDESLAIGEFSVNNYQILYCLATLIKVSVSFDGVLGLTVGINEVELRYPTGTPTIQSGYIKYALNLATITDNLKYIIPILQRRISEAEQSITDDAIVNTVTSSVSYQLALASKANTDDLGNYATNDKLDDLSSDVDKRISDKFDSIDFSPYVTQSQLDQTASDITAKFHAAGGMNLIKNSIGFSGLDFWTLTYPSNASTVSTISTLELDSLGFGSGFVYTPDGVPQGINQTVTVIEGQPYTLSWYLNKRTSGSTSGFRFWVQILEDGVIKMQIADNSSQLTTGFESQYMTYTPTSDNITVRFIGYGNVDATLTGIMLTIGDVPLKWSLSTGEVYNTYVRMNLQGIRVSQLDADRNEIGYTAITPTEFAGFYDTDGTGNFEKIFYLNGEETVTKKLRAKDEITMGKVKILNIASSIRNGWAIVPNIE
Physico‐chemical
properties
protein length:1251 AA
molecular weight: 136559,23160 Da
isoelectric point:4,56851
aromaticity:0,09752
hydropathy:-0,27714

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Bobb
[NCBI] 		1527469 Uroviricota > Caudoviricetes > Herelleviridae > Agatevirus > Agatevirus bobb
Host Bacillus pumilus
[NCBI] 		1408 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009056444.1 [NCBI]
Genbank nucleotide accession
NC_024792 [NCBI]
CDS location
range 99824 -> 103579
strand -
CDS
ATGGCATTAACCGCAGGACAGATAACACTAACAAACCTGAACGATGCAAAACAGTACATATTGTACTTGAACGGTAATGTACGTACTCAAATATTTGATCCAAACAAAGGGACATACACGCCTAACTTTACAAGCAACAACTTAAGAATCACACCGGAGCTCTACGTTTCAGGAGGGGATGGAACTAACCTTCTCCCTTCTGCTAGTGTTAAGTCTCTCAAATGGTATGAGGGAACTCAAACGGATACTCCGTTAGCTGAGACCGATGCTGGCACAACACCTAGCGGACTAGCGTACTCGTTAACTACCGATCCGGCAACGGCTGCGGCTAAAACTCTTGTCATAAAGTCAAACCTCGCTAACCAAACAAATCAGATTTTTACTTGCGTTGTTACATACACAGAGACACTAACAAACTTCGACATTATCGTCAAGGCTAGTTTCGAAGTAATTAAAGTAGACAGTGGTATCTCAGGTGCGGATGCTTACTTTATCAACCTTTGGACTCCTAAAGGTGACACGATCCGTAACAGTGCAGGTAGAGTAGAAATTCAAGCCGACATGTATAAAGGCTCTGACAAAGTAACACCGACTGCGTTCAAGTGGTACATCCAAAATGCTGATGCCACTCCTGAGAACTTAGGGGATGCGGATGGCGGAGACGGGTGGGAGTTACTCACTTCTTCAAACAATCACGGTGTCACTGGATACACGACTTCAAAGATTTCAGTACCTGCGGGCGCAATTGACGGAGTAAAAGGATTCCGCTGTATCGCTACGGCACCTACAACCGGAGTTAAATATTCGGGTGTTGTTATCGCACGAGACTTCCAAGACCCTATTATGGCGGACATTCTCGGATCGTCTGTTTACAAAAACGGAGTAGGGTCTGTGGAATTTACAGCACAGCTAACTCAAAACGGTACAATCATTTCTACTAGCGACTTTAACTTTGCGTGGGCACTCTACAAGTCTGATGGAGAGCTAGTCAAAAAGTATACATCGGTTACCGGAGATAAAGTAACTGTTCCTTCTGCGGATGTAAAAGGAACGAGTAACCTTATTGTCGACGTTAGCAAAAAGGCAGTCCAAGGACGAATCGTCTCTTCAGGACAAAAGACACTTGTAAACTTGAATGACATTGCTACTTCACCAACTCCACCGGAAAACCCTACAGACGGAATGATATGGGTGAATACTTCCCAAGAACCATTCAAATTCTATATTTACCGAGAGATATCAGGTGAGTGGGAGCAAACAGGTCCTTTGAACTTATCGCAGCTTGATCCTGACGCAGATCAGCAGGTGAAGGATGCTTACAACGGTATAACAGACCTAGATTCCGATAGCAAGCTCACACGGTACGAGAGAAGTGTTGTAAGGGCTGAGATCGCAAATATCGTAGGGAGGTTCCTTGAGTCCAACGAGAGTATGCCGACCCTAGAAGAGATTGACGCAAGTCAACTAGGTCAAGCTTACGCTATTCGGAAGGCTGCTAGTGATATCGGAGTATCCAGTATCAACGAGTTTTTCGTAAACTTCGGTAATGCGTACTCTGCACTTAGAACTTATCTCGGGGATTTAACACCGAAACCGTGGGATATTGACACGGCTAACAGCCTCACAATCGACTCGGCTACGTGGGATGACGCTTGGAACAACTACAAATTACGCTACCATCTCTTAAATACAGAAATACAAAAAAGACAACAACAGTACGCCGATCAGGTTGGAGAAGGGGCAGTAAGAGACGCAATTCGAGCAGTTAGTAGTACAGGTGAATTTGAAACGGCTCCTATTACATCTTCTTCTAACATAGTGATAATAGATTCTCCTCTTGCGAGTGTAGGTCTCCCTGAGTTTCATGGTAGACATTATGATGGTTGGATAGCTAACGGAGTTGACCCTGCTAACCCACCTAACGAATGGGTTTCGAACGGAAACAGGATAGTTCCTGTTACAAACCCGTCTTTCTTAGGACAAGGGGTACTAACTGTATATGGAAAGTTTTATGGTCAAGGAGACTACTATGACAATATTAAATGGGAGGATAATGGAGAGCTAACCAAAGAAAAAAGATGGGAAGACAAGTTAATTGATGAATCATATGAGTGGGAACTTGCAGCTGATAAGGAAGGATTTAAAAGCCTAGTCTCTCGGTCATTTGCTGATGATGTTATCGGAGCCACCGTGACAGGAGTTAAGTCTACAGGAGAGTTACTGACAACGACAACAGAAATTACTACGATTGACCAAGCTCAGTTGAATAGTGACGGTCATTTATACATCTCCGTCGCAGACAACGATACTGGATGGGGAGAAACATACAACCCTACCCCGGAAGAGATGAAAGCATACTTCCTTGGATGGAAGATGTGTAACGGAACATTCGGAAGTAACTATAGCGGGACTGGAACTAAAACTTGGCATCCACTTAAAGATACTGACCTTTCTCGAGCCGTCACAGTAGTTCCTTCTGACGAGTCTTTAGCTATAGGAGAATTTTCGGTTAATAATTACCAAATACTGTACTGTTTAGCTACATTGATTAAAGTCTCTGTCTCGTTTGACGGTGTTTTAGGTTTAACGGTAGGAATAAATGAAGTTGAACTTCGATACCCTACCGGCACCCCAACCATACAGAGCGGTTACATAAAATATGCCTTAAACCTTGCCACAATAACAGATAACTTGAAGTACATTATTCCTATATTGCAGCGAAGAATATCGGAAGCGGAGCAGTCAATAACAGACGATGCTATTGTAAACACCGTAACTAGTTCTGTATCGTACCAGCTAGCACTCGCAAGTAAAGCTAACACCGACGATCTTGGAAACTATGCTACAAATGACAAGCTAGATGATTTATCTAGTGACGTTGACAAAAGAATTAGTGACAAGTTCGACAGTATTGACTTCTCGCCATATGTCACACAGTCACAACTAGATCAGACAGCTAGTGATATCACGGCTAAATTTCATGCAGCAGGCGGAATGAACCTTATTAAAAACAGTATAGGGTTCTCCGGTTTAGATTTTTGGACATTGACGTACCCAAGCAATGCCTCTACAGTTTCGACCATTAGTACATTAGAGTTAGACTCTCTTGGGTTTGGTAGTGGTTTTGTTTACACGCCTGACGGGGTACCCCAAGGGATCAACCAAACGGTTACTGTAATAGAAGGGCAGCCATACACGTTGTCTTGGTATCTAAATAAGCGCACTTCAGGTTCAACAAGTGGATTCCGCTTTTGGGTACAGATTTTAGAAGACGGTGTCATTAAAATGCAGATAGCAGATAATTCATCCCAGCTAACTACAGGATTTGAGTCTCAATATATGACATACACACCTACCTCGGACAACATAACAGTTCGCTTCATTGGCTACGGTAATGTAGACGCTACTTTAACGGGTATCATGCTAACCATTGGGGACGTTCCTCTTAAGTGGTCACTCTCAACTGGGGAAGTTTATAACACTTATGTTAGAATGAACTTACAGGGTATTCGTGTTTCACAGCTCGATGCAGATAGAAACGAGATCGGATACACCGCTATCACACCTACAGAGTTCGCAGGGTTCTACGATACGGATGGTACGGGTAACTTCGAGAAGATATTTTACCTGAACGGGGAAGAAACCGTAACCAAGAAGCTAAGGGCTAAGGATGAGATAACAATGGGTAAAGTAAAGATTTTGAATATTGCCTCTTCTATCCGAAATGGTTGGGCAATTGTACCAAATATAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d35fe8b75de068ed25bd6bc5d712b2749ae612270fbd409ec5631cd583f0fe0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2769
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bioinformatic genomic analysis of Bacillus phage Bobb Lewis,H.M.N., Temple,L., Barth,R.N., Bowles,K.M., Churchin,D.I., Scott-Croshaw,C., Glasgow,G.H., Gloe,M.W., McGough,T.M., Nutbrown,S.A., Romulus,S.R., Sanders,K.A.M., Diachok,C.R., Serigano,J.P., Shin,D., Suresh,M.H., Conner,A.R.N., Korba,R.M., Livermore,R.J., Rohlf,M.B., Utterback,S.D. and Wilson,V.E. 2015-07-03 — GenBank