Protein

View in Explore
Genbank accession
ARQ95337.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATTRLMDHILAGNATEYERVLASQVDRLLQLNIPIRELWNPWTCPENLLPYLAWALSVDLWDPKWSITKRRSVIANAVAHHRLKGTLAGIETYLGLVDTTVIKATQPPAKLFSGPSLDKAKREAWLAQLPQVRVWRQYETSTAGKRIFSGGQRYSTSFFEGRFPQPNDAIVRLQRRARWVVNGQETDTRVENFESYFRIFIKAIRKNSIFSKTIVRAKSKFWVPSTASSRIVTIEPTSLSPWRSTVGPRLEPVTSEPELVKVPGTEGHAVYTNRPIYNRFYIPSRAGFRLFERYPVYDAAFPAPTKRPSIQFMGVGRYGIKPHSAELKVAMSTKWSKSKARLNDCYVPRTRFWTPHDGSLMEKSRQAVIAAKRLSDKILLDTNTKPGFIAGLPRFAGDPLII
Physico‐chemical
properties
protein length:403 AA
molecular weight: 45861,35640 Da
isoelectric point:10,28685
aromaticity:0,10670
hydropathy:-0,34119

Domains

Domains [InterPro]
IPR006521
STR
13–101
IPR006521
IPR006521
STR
13–92
IPR006521
IPR006521
STR
13–105
IPR006521
ARQ95337.1
1 403
Architecture
STR
STR 13-105 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage BDU-MI-1
[NCBI] 		1983459 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bradyrhizobium diazoefficiens
[NCBI] 		1355477 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ95337.1 [NCBI]
Genbank nucleotide accession
KY940711.1 [NCBI]
CDS location
range 67898 -> 69109
strand -
CDS
ATGGCCACGACTCGCCTGATGGATCATATCCTTGCTGGAAACGCCACGGAGTATGAGCGGGTTCTGGCCTCGCAAGTCGACAGGCTGCTGCAGCTGAACATCCCGATCCGGGAGCTGTGGAACCCCTGGACCTGTCCGGAGAACCTGCTGCCTTACCTGGCATGGGCGCTCTCGGTCGATCTCTGGGATCCAAAGTGGTCCATCACCAAGCGCCGGAGCGTGATCGCCAATGCGGTCGCGCATCACCGGCTGAAGGGTACGCTGGCCGGCATCGAGACCTATCTCGGGCTGGTCGACACCACGGTGATCAAGGCTACGCAGCCGCCGGCCAAGCTCTTCTCCGGTCCGTCCCTGGACAAGGCGAAGCGCGAGGCATGGCTGGCGCAGCTGCCTCAGGTTCGGGTCTGGCGACAATACGAGACTTCGACGGCCGGCAAGCGCATCTTCAGCGGCGGCCAACGATACAGCACCAGCTTCTTTGAGGGGAGGTTTCCCCAGCCGAACGACGCCATCGTCCGCCTGCAGCGCCGGGCGCGCTGGGTGGTCAATGGCCAGGAGACGGACACCCGGGTCGAGAACTTCGAGAGCTACTTTCGGATTTTCATCAAGGCGATCCGGAAAAACTCGATCTTCTCCAAGACGATCGTTCGGGCGAAGAGTAAGTTCTGGGTGCCTTCCACGGCATCATCTCGCATTGTAACGATCGAGCCGACGTCCCTGTCACCGTGGCGTTCGACCGTTGGACCCAGGCTGGAGCCCGTTACGTCGGAGCCCGAGCTGGTCAAGGTGCCCGGCACCGAAGGTCACGCCGTCTACACCAACAGACCGATCTACAATCGGTTCTACATTCCCTCGCGCGCCGGCTTCCGGCTGTTTGAGCGGTATCCGGTGTACGACGCGGCGTTTCCCGCGCCGACCAAGCGCCCGTCGATCCAATTCATGGGCGTCGGCCGGTATGGCATCAAGCCGCATTCAGCTGAGCTGAAGGTCGCGATGTCCACCAAGTGGAGCAAGAGTAAGGCTCGGCTGAACGACTGCTACGTTCCGCGGACCCGCTTCTGGACGCCTCACGATGGCTCGCTGATGGAGAAGAGCCGCCAGGCAGTGATCGCCGCCAAGAGGCTCAGCGACAAGATCCTGCTCGACACGAATACCAAGCCGGGGTTCATCGCCGGCCTGCCACGCTTCGCAGGTGATCCCCTGATCATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2a3f5828ee6392ca68556ddd9ba14ca7a223412f71db8a410020f8db566ec97
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel bacteriophage infecting Bradyrhizobium diazoefficiens USDA110T Liu,J., Yu,H., Huang,Y., Yu,Z., Fan,G., Jin,J., Liu,X. and Wang,G. 2017-07-27 — GenBank