Protein

View in Explore
Genbank accession
CAL9992754.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALLAWYPLHKDTNDWSGFENHAHGANSTSGNGVIGGNVLESTLHIDKNEQLDQVLSGDEATLCFWVQGDSDGSDWADIVSYQPSTGAATVRFERGNIDDDVNQYDYWCNWFNGATSGNGVVTTNYRVGPIADWHHVTIRRTPTRVSIYINAEFDRMFNVSNDISPPTGAVTLIAHTSARVRLQDVRFYDNAISDREMKDIALGTVAKWNMNGANEFLPRNSTRNPDFLPGAAYVNGTWDTELNKDAILCESWSSGYNGGVPDPEIGYHAKWVNIDGKAVMRHINDNQRFGYGDRWMGISCGHGNLVDYGLEVGDRITVSWTQRSTHTGATFNVGFYTRRADNSTKWESGKITHTQNVAGEWERKSYTTTVGSDTDVNRSITIYFYGHYSVEGATMEAKDIQFECHRDVANPYRKFSADDVIVSDMTGLENNALLEYDYAPSYVENDTERGSGHFHFPSSGRTGWNDIRRHIRTTANHMSRQVSVAFWARTTQGDNRNPFMKYDDGIYTEGSQVSGGAILLCLEGNRFRMHGWGSSDPICSTHTNDGEWHHYVWTFDYDTRLANMFVDGVREVANSLDSEGVIQPLENYVWTIGANMHPYSSTTGATFNGDITEVSIHGKALSVDEVSRLYNVKASVDNLGNAHAVEFQEGWDHDGENTIAVRSSSSGNTGTYVNGTKVGVTSSWRGINFCIFDQSMTLRAYGGLDTYSGTTTQYYEFDGEVIVASANDIPDSAQVAANHLKDAIDRMEDGWLMTAARCDASTTQDGTLGEYFERYFGVTENHAIASRGTWGFIGIKNGELLTQFSDGRRYDATSGSITYYTKEYAATGGFHKPQVTKNGVMHAGELIEVITDPDSLGDSQAKMNSDGSFIVNEFNEV
Physico‐chemical
properties
protein length:878 AA
molecular weight: 97460,43320 Da
isoelectric point:4,92813
aromaticity:0,11162
hydropathy:-0,53132

Domains

Domains [InterPro]
DC_2221
ATT
1–43
DC_2221 G3DSA:2.60.120.200 DC_0004 G3DSA:2.60.120.200
PF13385
LEC
54–197
PF13385 IPR013320
IPR013320
STR
54–207
IPR013320 PF13385
CAL9992754.1
1 878
Architecture
ATT
STR
STR
ATT 1-43 | STR 44-229 | STR 285-651 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9992754.1
1 878
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,0009
Central domain 175 373 200 0,1983
C-terminal 374 878 504 0,5554
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-373
C-terminal
374-878

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D482
[NCBI] 		3105245 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9992754.1 [NCBI]
Genbank nucleotide accession
OZ195769 [NCBI]
CDS location
range 199425 -> 202061
strand -
CDS
ATGGCATTATTAGCATGGTACCCGCTCCACAAAGACACCAATGACTGGAGTGGGTTTGAGAATCACGCACATGGTGCAAATTCGACAAGCGGAAATGGTGTGATTGGGGGCAATGTACTTGAGAGTACATTGCACATCGATAAAAATGAACAACTTGATCAAGTTCTCTCAGGCGACGAGGCTACATTGTGTTTCTGGGTGCAAGGTGATTCTGATGGGTCTGATTGGGCTGACATTGTTAGCTATCAACCATCGACTGGCGCAGCAACGGTGCGTTTTGAGCGTGGTAATATTGATGATGATGTCAATCAATATGATTACTGGTGTAACTGGTTCAATGGCGCAACTAGTGGTAATGGGGTTGTTACAACCAATTATCGGGTCGGGCCTATTGCTGATTGGCATCACGTAACAATACGCAGAACTCCGACGAGAGTTAGCATATACATCAACGCAGAGTTTGATCGTATGTTTAACGTATCGAATGATATATCACCACCTACTGGGGCAGTGACATTGATTGCTCACACGAGTGCTCGTGTGCGATTGCAAGATGTTCGCTTTTACGACAACGCGATTTCAGATCGTGAAATGAAAGACATCGCACTTGGGACAGTTGCAAAGTGGAACATGAACGGGGCGAACGAGTTTCTACCGCGTAACAGCACGCGTAACCCTGATTTTCTACCGGGTGCTGCGTACGTCAACGGAACATGGGACACTGAACTGAACAAAGACGCGATCTTGTGTGAAAGTTGGTCAAGTGGCTACAATGGCGGCGTCCCTGATCCGGAAATTGGCTATCACGCGAAATGGGTGAATATTGACGGTAAAGCTGTAATGCGCCATATCAATGATAATCAGCGTTTTGGTTACGGGGATCGTTGGATGGGTATCTCATGCGGTCATGGGAATTTAGTTGATTATGGTCTTGAAGTTGGCGACCGAATCACAGTCTCATGGACGCAGCGTTCAACTCACACTGGCGCGACGTTCAACGTTGGATTTTACACGCGTCGAGCTGATAACTCTACAAAGTGGGAATCTGGTAAGATAACACACACGCAAAACGTTGCAGGTGAATGGGAACGCAAATCGTATACGACGACTGTTGGCTCTGACACTGATGTGAATCGTTCTATTACGATTTACTTCTATGGTCATTACTCAGTCGAGGGCGCGACGATGGAAGCGAAAGACATTCAATTTGAATGCCATCGTGACGTGGCAAACCCATATCGCAAATTCAGTGCTGACGATGTTATCGTCTCTGATATGACTGGTCTAGAGAACAATGCTCTTCTTGAATACGACTATGCGCCATCTTATGTTGAGAACGACACTGAACGCGGTTCTGGTCATTTTCACTTCCCGTCTTCGGGACGTACTGGTTGGAATGATATTCGAAGACATATTCGAACAACTGCGAATCACATGTCGCGTCAAGTATCAGTTGCATTCTGGGCTAGAACAACACAAGGTGATAATCGTAACCCATTCATGAAATACGATGATGGCATTTATACTGAGGGAAGTCAAGTCTCTGGTGGTGCTATTTTGCTGTGTCTTGAAGGCAATCGATTTAGAATGCACGGTTGGGGTTCAAGTGACCCGATTTGTTCGACGCATACTAATGATGGCGAATGGCATCACTATGTATGGACGTTTGATTACGATACGCGATTAGCTAACATGTTTGTCGATGGCGTGCGTGAAGTTGCAAACTCGCTTGATAGCGAAGGCGTGATTCAACCATTAGAAAACTACGTGTGGACTATTGGCGCTAATATGCACCCTTATTCTAGTACGACTGGTGCTACGTTCAATGGTGATATTACTGAAGTTTCGATTCATGGTAAAGCACTGTCAGTCGATGAAGTTTCTCGCTTGTACAACGTGAAGGCATCTGTTGACAATCTAGGCAATGCACATGCAGTCGAGTTTCAAGAGGGTTGGGATCATGACGGCGAAAATACGATAGCAGTCCGAAGCAGCTCAAGCGGCAATACGGGTACATATGTGAACGGTACAAAAGTCGGTGTCACTAGTTCATGGCGCGGAATCAACTTCTGTATATTCGATCAATCAATGACGCTTCGTGCTTACGGTGGTCTTGATACGTATTCTGGAACAACGACTCAATATTACGAGTTTGACGGTGAAGTGATCGTCGCATCTGCTAACGATATCCCTGATTCTGCTCAGGTCGCTGCGAATCATCTAAAAGACGCGATTGATCGCATGGAAGATGGCTGGTTGATGACTGCTGCTCGATGTGATGCAAGTACAACGCAAGATGGTACACTAGGTGAGTATTTCGAGCGATACTTCGGGGTCACTGAGAATCATGCTATTGCGTCTCGTGGTACTTGGGGTTTTATCGGCATCAAGAATGGCGAGTTGTTGACTCAGTTCTCTGATGGTCGTCGTTATGATGCTACGAGCGGTTCGATTACGTACTACACGAAAGAATATGCAGCGACGGGTGGGTTTCATAAACCTCAAGTTACTAAAAATGGCGTCATGCACGCGGGTGAATTGATTGAAGTCATAACTGACCCTGATTCGCTTGGCGACTCTCAAGCTAAAATGAACAGTGATGGTTCGTTCATTGTCAATGAGTTCAATGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
30bb0eea8e8ccbb6d9ef54dd98a3aa546bfecd3003069f0824fae15a57447776
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3005
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50