Protein

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UniProt accession
A0A059PAH9 [UniProt]
Protein name
Collagen-like protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIKTLSMSTTGLKFADNNTPIYLTAENNGIIFKDTTYLPKVYIKQNDVGYLTNFPATWQDEKITFTSAQLANLPSGSYRIEVWFEHDSDTLIYPDYGFLKLNINHNATDIEGNVISSITVEQFQQQFSTLSQELTDKILAIKVGPQGKKGDIGPQGIQGIQGARGDQGPQGIQGIQGVAGKDFSIAETFPSVASMRGDHLTKGDFVMISSTVEDPDNAKLYLWNGAEFTFVTDMSGATGIKGDTGEQGIQGKQGEKGEQGKQGIQGVQGETGPAGKDAVINVVTQAEYDKLPDKTGVYFIGG
Physico‐chemical
properties
protein length:302 AA
molecular weight: 32594,98450 Da
isoelectric point:4,70976
aromaticity:0,08940
hydropathy:-0,38874

Domains

Domains [InterPro]
DC_1340
STR
103–301
DC_1340
IPR050149
Unmapped
144–276
IPR050149
IPR008160
STR
144–180
IPR008160 G3DSA:1.20.5.320
G3DSA:1.20.5.320
STR
153–208
G3DSA:1.20.5.320 IPR008160
A0A059PAH9
1 302
Architecture
STR
STR 103-301 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Leuconostoc phage phiLN12
[NCBI] 		1262517 Uroviricota > Caudoviricetes > Mccleskeyvirinae > Limdunavirus LN12 >
Host Leuconostoc pseudomesenteroides
[NCBI] 		33968 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFY98367.1 [NCBI]
Genbank nucleotide accession
KC013025 [NCBI]
CDS location
range 26482 -> 27390
strand -
CDS
ATGATTAAGACATTATCTATGAGTACAACAGGATTAAAGTTCGCAGATAATAACACGCCAATATATTTAACGGCTGAGAACAACGGTATTATTTTTAAAGACACCACTTATCTACCAAAGGTTTATATCAAGCAAAACGATGTTGGTTACCTCACTAATTTCCCAGCGACATGGCAAGATGAAAAAATTACTTTCACGAGCGCACAATTGGCCAATCTTCCATCTGGCAGTTATCGTATAGAAGTTTGGTTTGAACATGATAGTGATACCCTAATTTATCCGGACTATGGCTTTTTGAAACTTAATATTAATCATAACGCTACTGACATCGAGGGAAACGTTATCTCTTCTATTACTGTCGAACAATTTCAACAACAGTTTAGTACCCTATCTCAAGAACTCACGGATAAAATACTAGCCATCAAAGTTGGACCACAAGGTAAAAAAGGCGATATTGGACCACAAGGCATTCAAGGTATTCAGGGAGCGCGTGGCGATCAAGGACCACAAGGTATTCAAGGTATTCAAGGAGTAGCGGGTAAGGATTTCTCGATTGCAGAAACGTTTCCAAGTGTTGCGTCAATGCGGGGTGACCATTTAACAAAGGGAGACTTTGTTATGATTTCATCAACTGTTGAAGACCCAGACAACGCAAAACTATATTTGTGGAACGGTGCGGAATTTACTTTTGTTACTGATATGTCAGGTGCTACTGGTATCAAAGGAGACACTGGTGAACAAGGTATACAAGGTAAACAAGGTGAAAAGGGTGAGCAAGGTAAACAAGGTATACAAGGCGTTCAGGGTGAAACGGGACCCGCTGGTAAAGACGCCGTCATCAACGTTGTTACGCAAGCAGAATACGATAAACTACCTGATAAAACTGGTGTTTACTTTATAGGAGGTTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
f95c4d752a63f8a2eb7d74b781ee3eb53201d161eeecc603ca6867da9c03cd73
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8151
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50