Protein

View in Explore
Genbank accession
XCO42266.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLAAEGRAGEVNQILAEQQLINEGEIRKELTGVQDSIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAALKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR
Physico‐chemical
properties
protein length:521 AA
molecular weight: 57088,71070 Da
isoelectric point:4,99094
aromaticity:0,03647
hydropathy:-0,68464

Domains

Domains [InterPro]
DC_0193
STR
1–521
DC_0193
Coil
Unmapped
202–229
Coil
XCO42266.1
1 521
Architecture
STR
STR 1-521
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_TUMS_PL
[NCBI] 		3163585 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO42266.1 [NCBI]
Genbank nucleotide accession
PP910670 [NCBI]
CDS location
range 16335 -> 17900
strand +
CDS
ATGGCCCAAGAGATCACTTGGCGTAACATTGGTGCAACGGTAAGTCCTGGCAGTGCATCTTCGATGTCTGCTGGGACTACCGGTGTCCAACAAGCACTTGGTGCACTGGGTGACATCATCTCCCGTCAACAGGAGATGAACGTCAACAATGCCAAGTTGCAGCGTGAAGCCAACACGCAAAGCTATCTGGACCAGGTGGCAGCATCCACCCTGGAACAACTCAGCAACGCAGACTATCGCAGTGGCCTGGAGGCCCAACGTGATGCGATGGGGATGAACCTTGATCGTGCTGCTACTCGTGATGCGATCACCAAGCAGATCAGTGCTCAGCAGAACCAAGCGGCTGCTACTCAGAAGTTCGACGACATGCAGGCTGAGGTAGGTCAACGAGGCATCGTAGACCAGCTTCGTACCCTGGCAGCTGAAGGCCGTGCTGGCGAAGTCAATCAGATCTTGGCTGAGCAACAGCTGATCAACGAGGGTGAGATCCGCAAGGAACTCACCGGTGTGCAAGATTCTATTCAGAATCGGCAGTACCGGGCAGCTGGCGAACAGCGTGCTCAGGCAGCGGCCAACCGGGCGGCTGAAGCACACTCCCTCTCCATGGCTGCTGGTCGGGAGAATCTGGCTTTCACTCGTGAGCAGCGTGATGAACTACGCCGTGATCGGGATGAAGCGAAGCTGGTTTCGGGAACCATCGCTACTACCTTCCAGGACTACGACGAGTCCCGTCAGGCTCAGAGCGAGATCATGCGGATCGTGGGCAAGGAAGTCGGTATGCCTACCGATGACCAGGGCATGCCTGACATGAGCCGAGCTTCGCAAGACCAGCTTGATGCCTTCAGCAATGCGCTGAATGAAGCTGGTGTGCAAGCCAATACCTCTCCTACCGAGCGACGTAATGCTGCACTCAAGTCTCTCGTGGATGCCGGGGTAAGCTCGAAGGGTATCGCCCAGGCCAAGCAAGAGATGGAACTACGGGAATCCCTGGAGGGTCTGGCTCCGCAAGATCGTACGAAGGTTGAAGCAACCATCGGTGCGGTTAACGCAGAACTGGATACCCTGCAACGGACGGCTACCGAGGACTACGAACGGGAAGTTGCACGTAACCCGTTTGTCGAGCCTGACAAGGATCCGCTGGGTTCGGTCAACAAGATCGTAGACAAGGCTGTGAAGTCTGGTTTCGGCTGGGAAGGTGACCGCCAAGATCTGAACAACATGCTTGTGGACTTCGCCACCAATGGCATCAAGCTGCCGGACGGACGTACTGCTGTAGTCCCGTCGAAGCTGCTGGAGCAGGCGTTCAACACCACGAACACTTGGCTGTTCAAGAATGCCGGTGACGTAGAGAAACGGATCATCGAACTCATGACCACTGATGGCATGACGCAGATGCGAGAAGACGCTCCGACCATTCGGGAAAACTTCCTGAAAACCGTGTCGGATATCGCCAACCAAAAACGGTCGAATGCCGTTAAGGTAACTCGCTCGGCAGAACGGGAAAAGGGTGTTACCATGGACCCAACCGATGATCTAACTTTTGCACTACGAGGGAGGAAACGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6b6575239eaa3de89691fe679e17c96ffdab968435da4e7277175b9cdcf0144f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7159
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, Characterization and Genomic Analysis of vB_Pae_TUMS_PL, A Lytic Bacteriophage against Pseudomonas aeruginosa Kamyab,H., Torkashvand,N., Shahverdi,A.R., Khoshayand,M.R., Sharifzadeh,M. and Sepehrizadeh,Z. 2022-11-10 — GenBank