Protein

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Genbank accession
QPB12131.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSYSFLRESKIIIEHEGRRYAFSALSTMNYDTTMAEYKVNRRTVHGKSNYPVSIVTGFNPVTLSLIVNFSNNSLESMFFEWLGMGREGNTLYLPFNSKLEPTYLKVYIQYQSGAIFELTPAYVSNADFSLEKGIPELSVGIIASNVTQLRELLPHPSLDQSEVSIPSPLFCTLNGIDLPSIRGSGLSFQQQCTWREEKSIYEIGQMSYPKKAVINEMNFSANINMYKREMHGKPESNFLKIDEPLYGHHLQIYTNKILVDIPSARVTKRLTADETLSMSLDIIPMYNSPAPVSITFK
Physico‐chemical
properties
protein length:297 AA
molecular weight: 33704,19070 Da
isoelectric point:6,32558
aromaticity:0,10774
hydropathy:-0,21145

Domains

Domains [InterPro]
IPR056389
ATT
1–296
IPR056389
QPB12131.1
1 297
Architecture
ATT
ATT 1-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB12131.1
1 297
Domain Start End Length (AA) Confidence
N-terminal 1 292 292 0,8385
Central domain 293 292 1 0,2655
C-terminal 293 297 4 0,8735
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-292
Central
293-292
C-terminal
293-297

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage PSTCR5
[NCBI] 		2783547 Uroviricota > Caudoviricetes > Demerecviridae > Priunavirus PSTCR5 >
Host Providencia stuartii
[NCBI] 		588 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB12131.1 [NCBI]
Genbank nucleotide accession
MW057857 [NCBI]
CDS location
range 35675 -> 36568
strand -
CDS
ATGAGTTACTCTTTTCTTAGAGAGTCGAAAATAATCATAGAACACGAGGGAAGACGCTATGCGTTTTCCGCTCTGTCAACAATGAATTATGACACGACTATGGCTGAATATAAAGTAAATAGACGGACTGTTCATGGAAAGAGTAACTATCCTGTATCTATCGTAACTGGGTTTAACCCAGTTACTCTTTCTTTAATAGTAAACTTCTCCAATAATAGTCTTGAGTCTATGTTCTTTGAGTGGTTAGGGATGGGGAGAGAGGGTAATACACTATACCTACCTTTTAATTCCAAACTTGAACCTACTTACCTAAAAGTATATATTCAATATCAAAGTGGAGCGATTTTCGAGCTAACCCCTGCATATGTTTCAAATGCTGACTTCTCTCTAGAGAAAGGTATCCCTGAACTAAGTGTCGGTATTATAGCCTCCAACGTTACTCAATTAAGGGAATTACTTCCGCATCCATCATTGGATCAGTCAGAAGTTAGTATCCCCAGTCCTCTGTTCTGTACTTTGAACGGAATTGACCTGCCATCTATTAGAGGATCTGGTCTATCTTTCCAACAGCAATGTACATGGAGAGAGGAGAAATCAATCTACGAGATTGGTCAAATGAGTTATCCGAAAAAGGCTGTAATAAACGAAATGAATTTCTCAGCTAATATAAATATGTACAAACGAGAAATGCATGGTAAGCCTGAAAGTAACTTTCTGAAGATTGATGAACCTTTATACGGTCATCATCTCCAGATTTACACAAATAAAATTTTAGTGGACATCCCTAGTGCTAGGGTGACTAAACGCCTAACTGCTGATGAGACTCTCTCAATGAGCTTGGATATAATTCCAATGTATAACTCTCCAGCCCCCGTAAGTATAACATTTAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ac81550bdcf8416b1f8e552f88b58abf712aa2e3675006c4ce853caf2dfad9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7896
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages targeting Providencia spp. as potential agents for phage therapy Rakov,C., Alkalay-Oren,S., Coppenhagen-Glazer,S. and Hazan,R. 2021-04-02 — GenBank