Protein

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Genbank accession
QXN72436.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MKLKCIAGTALHAGVESASVFGPVLVDLVAGQQNAVKYSNSYNLSSSAFGNGALITQNADFAIFGHNAGAVILDLNTNGFVTPWTTAPSSAVIAIAQRKTDGLIAVATTGAPYLFLYTYPDFTYVPGPAAINPPPSAVNAVSFSDDGTKLCVGHSTLPGLMVYDTTTWANILPTLGTTPTSATGLSGAAISPDGTKVAICGGSTGNRNRVWNLSTGALIYSQTTTTTTFVLFTPDSSKVIWQPDALTGFLQYTFATSTAATFSITGVSGAGSSSIGRNIQMTDDGLMLVHCRGVTVFYDYTNNVVLSQTPNENNVNCPKAALHPGTKRRKLAGTVTDAATDPVERKIEAFDMASGRFLGSGTSDPVTGEFEFVVYSSALCYAVAEGVGVEQSRIISNITPALP
Physico‐chemical
properties
protein length:403 AA
molecular weight: 41890,68670 Da
isoelectric point:5,50107
aromaticity:0,08685
hydropathy:0,15310

Domains

Domains [InterPro]
IPR015943
STR
30–377
IPR015943
SSF82171
STR
58–250
SSF82171
DC_1745
RBD
149–400
DC_1745
QXN72436.1
1 403
Architecture
STR
RBD
STR 30-377 | RBD 378-400 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXN72436.1
1 403
Domain Start End Length (AA) Confidence
N-terminal 1 94 94 0,2012
Central domain 95 293 200 0,4509
C-terminal 294 403 109 0,5092
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-94
Central
95-293
C-terminal
294-403

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacter phage RcThunderbird
[NCBI] 		2835986 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXN72436.1 [NCBI]
Genbank nucleotide accession
MW677526 [NCBI]
CDS location
range 22374 -> 23585
strand +
CDS
ATGAAGCTTAAATGTATCGCCGGAACTGCGCTTCACGCTGGCGTTGAAAGCGCAAGCGTTTTTGGCCCGGTTCTTGTTGATCTTGTTGCGGGTCAGCAAAACGCAGTTAAATATAGCAACAGCTATAACTTGTCGTCTTCGGCGTTTGGAAACGGGGCGCTTATCACGCAAAACGCCGATTTTGCAATTTTCGGGCATAACGCGGGCGCGGTTATTTTGGACTTGAACACAAATGGGTTCGTCACGCCTTGGACAACAGCGCCTTCTTCCGCCGTAATCGCTATTGCCCAACGTAAAACCGACGGTCTTATTGCCGTGGCAACAACGGGCGCCCCTTACCTGTTTCTTTATACTTACCCCGATTTTACTTATGTCCCCGGCCCGGCGGCAATTAACCCGCCCCCGTCGGCTGTAAACGCTGTTTCCTTTTCCGACGACGGAACAAAGCTTTGCGTCGGTCATTCGACTTTGCCAGGTCTTATGGTTTACGACACAACAACTTGGGCCAACATTTTGCCGACGCTTGGAACAACACCGACTTCGGCAACGGGTCTTTCGGGGGCGGCTATTTCGCCGGATGGAACGAAAGTCGCAATTTGTGGGGGAAGCACGGGAAACAGAAACCGCGTTTGGAACCTTTCGACGGGTGCGTTGATATATTCGCAAACAACAACAACAACAACTTTTGTTTTGTTTACGCCCGACAGTTCCAAAGTAATTTGGCAACCCGACGCGCTTACGGGTTTTCTGCAATACACTTTTGCAACTTCAACCGCCGCAACTTTTTCAATAACTGGCGTTTCTGGCGCGGGGTCTTCGTCTATCGGGCGAAATATTCAAATGACCGACGACGGCCTTATGTTGGTTCACTGTCGCGGGGTTACGGTATTTTACGATTACACCAACAATGTTGTTTTGTCACAAACCCCGAATGAAAATAACGTTAACTGCCCGAAAGCGGCGTTGCACCCCGGAACCAAACGGCGAAAACTTGCCGGAACAGTTACCGACGCCGCGACCGACCCCGTAGAACGCAAAATCGAAGCGTTCGACATGGCTTCAGGCCGCTTTCTTGGTTCTGGAACAAGCGACCCTGTTACGGGTGAATTTGAATTTGTTGTTTATTCATCGGCGCTTTGCTACGCGGTCGCCGAAGGCGTCGGGGTGGAACAATCGCGCATTATCAGCAACATTACCCCGGCGCTTCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5bf5d74180d40893bd8dad4dae5c81c8645428153ba7c1469851f80147ceb5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7765
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50