Protein

Genbank accession
YP_009882795.1 [GenBank]
Protein name
structural protein with Ig domain
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MPTITVLVAPEVVRNKPETERLHTVTGTAKGWEKTSLNQDPDEILTECKGLDALLTKSNLQADGVTKVDPTKPIGFEISYEIHDPSAVLTTGLTITPATAGGEVGQVVELLATVAPANATYQGVNWYSGDITKAVHIGGGKFKLLAPGSVTVYGVTIEGGHTDSTVITVAGALALSTDLAASQDVTAGEDATFTIAATGGTTPYTYAWYFSDVPGGEGVVIDAGANATAATASLVITAVDAADEGEYWCVVEDADGHSVASTRCEMAVV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 27645,52460 Da
isoelectric point:4,30626
aromaticity:0,05948
hydropathy:0,12045

Domains

Domains [InterPro]
G3DSA:2.60.40.1080
86–170
G3DSA:2.60.40.1080 IPR013783
IPR003343
91–160
IPR003343 IPR007110
IPR003599
180–269
IPR003599
IPR036179
181–263
IPR036179
PF13927
183–252
PF13927
cd00096
191–262
cd00096
YP_009882795.1
1 269
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage MK-13
[NCBI] 		2530042 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009882795.1 [NCBI]
Genbank nucleotide accession
NC_049455 [NCBI]
CDS location
range 34814 -> 35623
strand -
CDS
ATGCCAACAATCACTGTATTAGTAGCACCGGAAGTTGTTCGCAACAAACCGGAAACCGAGCGTCTGCACACCGTGACAGGCACTGCCAAGGGTTGGGAAAAGACCAGTCTTAACCAAGACCCTGACGAGATCCTGACCGAGTGTAAAGGCCTGGATGCACTTCTGACCAAGAGCAATCTTCAGGCTGATGGCGTGACCAAAGTTGATCCAACCAAGCCTATCGGCTTCGAGATCTCTTACGAAATCCACGACCCAAGCGCCGTGCTGACCACTGGCCTGACCATCACCCCTGCGACTGCTGGTGGTGAAGTCGGTCAGGTTGTTGAACTGCTGGCGACCGTCGCTCCGGCGAACGCGACCTACCAGGGTGTCAACTGGTACTCTGGTGACATCACCAAAGCTGTACACATCGGCGGTGGTAAATTCAAGCTGCTGGCTCCTGGTTCTGTGACTGTGTACGGTGTTACCATCGAAGGTGGTCACACTGACTCTACCGTCATCACAGTGGCGGGTGCGCTGGCTCTGTCTACTGATCTGGCTGCTTCTCAGGATGTAACAGCAGGTGAAGACGCAACCTTCACCATCGCTGCTACAGGCGGCACTACCCCATACACATATGCTTGGTACTTCTCTGATGTCCCTGGCGGTGAAGGTGTGGTGATCGATGCTGGCGCCAACGCCACTGCTGCAACTGCGAGCCTGGTTATCACTGCAGTTGATGCCGCAGACGAGGGTGAGTACTGGTGTGTTGTTGAAGACGCCGACGGCCACTCTGTGGCCTCCACCCGTTGTGAAATGGCTGTGGTCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
c0751f70f899db7c4b590dabbf0a8de45ae9701fbd7cc5dd194f24e0d9a32526
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7289
Evidence 0,7289
Download PDB

Literature

Title Authors Date PMID Source
Prevalence of Shigella boydii in Bangladesh: Isolation and characterization of a rare phage that can robustly identify Shigella boydii type 1 Akter,M., Brown,N., Clokie,M., Yeasmin,M., Tareq,T., Baddam,R., Azad,M.A.K., Ghosh,A.N., Ahmed,N. and Talukder,K.A. 2019-11-07 — GenBank