Protein

Genbank accession
QQM15978.1 [GenBank]
Protein name
tail collar domain protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAKIFNRPFATTGDREDLPVSDQPDGKASWDAGWTPDYELPSDNPNSRPVGRQEMNGVLHGVTEALGELQLFGFAKWQAVVGGWPLGAMAYHGGAVYKSTDGANTTQPGSPGAKWELAFWHSAALTGNPTAPTQAPGNVSTRIATTEFVAQELTRAIKDIPGVVRRVYTSNATWKKPAGLKSALVQVQGGGGGGGGTISTTATNRAVIGAGGGAGGYVEALISADALPAEVLVTHGASGGGGAVSGSGAAGGASSFGAILTASGGGGGGAGQVQQAAVTRGLAAGGVAGATSASAIGALSYGGESGGIGFSFAAAGAGISGNGGSSHLGVGGPSVAEGSPGLNASGYGAGGSGGCSGSPSGSDSGRPGGSGSPGVVIVTEYY
Physico‐chemical
properties
protein length:382 AA
molecular weight: 36693,80150 Da
isoelectric point:5,73593
aromaticity:0,06545
hydropathy:-0,05654

Domains

Domains [InterPro]
IPR049304
170–379
IPR049304
QQM15978.1
1 382
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage BAPh-3
[NCBI] 		2801362 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQM15978.1 [NCBI]
Genbank nucleotide accession
MW168446 [NCBI]
CDS location
range 17936 -> 19084
strand +
CDS
ATGGCAAAGATTTTCAACCGACCTTTTGCGACGACCGGCGACCGCGAAGATTTGCCTGTATCGGATCAGCCGGACGGCAAGGCATCGTGGGACGCTGGCTGGACCCCGGATTACGAGCTCCCGAGCGACAACCCCAATTCCCGCCCCGTTGGACGGCAGGAAATGAACGGGGTGCTCCACGGTGTCACGGAAGCGCTTGGTGAGTTGCAGTTGTTCGGGTTTGCTAAGTGGCAGGCGGTTGTGGGCGGCTGGCCGCTGGGCGCAATGGCGTACCACGGCGGCGCAGTCTACAAATCCACTGATGGGGCGAACACCACTCAGCCCGGCTCCCCTGGTGCTAAGTGGGAACTTGCTTTCTGGCATTCGGCCGCCCTTACCGGAAACCCCACGGCGCCGACACAGGCGCCGGGCAACGTCAGCACTCGCATCGCCACTACCGAGTTTGTAGCGCAAGAGCTGACCCGAGCCATTAAAGACATTCCGGGCGTCGTGCGCCGCGTTTATACGTCGAATGCGACGTGGAAGAAACCGGCAGGCCTCAAGTCCGCTCTTGTACAGGTGCAGGGCGGTGGCGGCGGTGGCGGCGGAACGATCAGTACAACGGCTACCAATCGGGCAGTGATTGGAGCGGGCGGAGGCGCTGGGGGGTATGTCGAGGCGCTCATCAGCGCTGACGCGCTGCCCGCGGAGGTTCTTGTTACTCACGGCGCTTCGGGCGGTGGCGGCGCCGTATCTGGCTCGGGCGCAGCGGGAGGCGCGTCCAGCTTTGGGGCAATCCTAACCGCGAGCGGCGGCGGTGGCGGAGGTGCGGGGCAGGTGCAACAGGCCGCTGTAACTCGCGGACTCGCTGCGGGCGGGGTGGCAGGTGCCACGAGCGCGTCCGCGATCGGCGCCCTTTCTTATGGCGGGGAAAGTGGTGGCATTGGCTTCTCCTTCGCGGCCGCAGGCGCCGGAATTTCTGGCAACGGAGGGTCGTCGCATCTAGGGGTTGGAGGCCCGTCGGTTGCCGAGGGCAGCCCTGGCTTGAACGCATCTGGCTATGGTGCGGGCGGGTCTGGGGGGTGCTCTGGATCGCCGTCCGGCAGTGATAGCGGTCGTCCTGGTGGCAGCGGGTCTCCGGGCGTCGTGATCGTCACGGAGTACTACTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2c9b7ad0ba2bce0ef9cb1360417784e3da9344e1ac325ba3ba649ed59aca04bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8892
Evidence 0,8892
Download PDB

Literature

Title Authors Date PMID Source
Genome sequences of Bordetella phages Churin,Y., Serian,D., Guetgemann,F., Mueller,A., Hammerl,J.A. and Kehrenberg,C. 2023-06-15 — GenBank