Protein

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Genbank accession
XLQ30062.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTPKTVRTYPINSVARDFTIPFEYLARKFVVVTLIGATRRELVLNTDYRFSTGTIITTTKAWGPGDGFNLIEIRRLTSATERLVDFADGSILRAYDLNISSVQSLHIAEEARDLTADTIGVNNDGNLDARARRIVNLADAIEDGDAVNLRQQKTWAGSALNQAQAAAQSAAQAAQSAAQALANKQATDQNLAATVQNNAQSLTNNQQSYQNLLAAQQQAAASAASAGASANSATASEASRQASAVSASQSYADANRSKAEADRAKTEADKLGNFNALGGALSSVNGTQVFWKGEQVSMNAGFQARTGADNEANFTMTDGNGNDPIRLVRTSDRRVHLYGNASGDGDRMVWGSTDVSTPKNFSVGGTLVANGQATFNGNVTTTGLTSTGEIVANGTVRSKSGVVQSFAPNQSANCHFWFYDSVGNSRGVLYADQSGVVRVQAGGALTATFGTDGVTQLNALNANRSGGQSYFYSPYAQIDGAMYGTCNLQLQGTGGGVAALGFHNAGRVAGALWLNNDNQLWWMQNSGNNAQMTTNQNVMNHIGGMTADQVGSIASMYNQSGTNLGIGGGVAGGSLRYASHNNVSGQGGSGSWRCLGSGNNGGVCNYVRYA
Physico‐chemical
properties
protein length:612 AA
molecular weight: 63979,34650 Da
isoelectric point:7,01299
aromaticity:0,07190
hydropathy:-0,32631

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0657
STR
1–609
DC_0657
XLQ30062.1
1 612
Architecture
ATT
STR
ATT 1-131 | STR 132-609 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLQ30062.1
1 612
Domain Start End Length (AA) Confidence
N-terminal 1 315 315 0,8820
Central domain 316 514 200 0,3225
C-terminal 515 612 97 0,9527
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-315
Central
316-514
C-terminal
515-612

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Brt_Psa3
[NCBI] 		3374901 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. actinidiae CFBP 7286
[NCBI] 		1094176 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ30062.1 [NCBI]
Genbank nucleotide accession
PQ453564.1 [NCBI]
CDS location
range 3709 -> 5547
strand -
CDS
ATGGCTACGACACCTAAGACGGTGCGGACCTACCCTATCAACTCCGTCGCCCGTGACTTCACCATTCCGTTCGAGTATCTCGCCCGAAAGTTTGTGGTAGTTACTCTGATCGGCGCGACCCGTAGGGAATTGGTTCTAAACACCGACTACAGATTTTCCACCGGAACCATCATCACGACTACCAAAGCGTGGGGTCCGGGTGACGGTTTCAACCTGATCGAGATTCGCCGCCTGACCTCTGCAACTGAGCGTCTGGTGGACTTCGCGGATGGCTCGATCCTACGCGCTTATGACCTGAACATCTCAAGCGTTCAATCGCTGCACATCGCTGAGGAAGCCCGTGACCTGACTGCTGACACAATCGGCGTGAACAACGATGGCAACCTCGACGCTCGTGCTCGACGCATTGTGAACTTGGCTGACGCTATCGAGGATGGTGACGCTGTGAACCTGCGCCAGCAGAAGACTTGGGCCGGGTCTGCACTGAACCAAGCTCAGGCCGCTGCTCAATCGGCTGCTCAAGCCGCACAGTCTGCCGCTCAGGCGCTTGCCAACAAACAGGCAACTGACCAGAACCTTGCGGCGACCGTTCAGAACAACGCTCAGTCCCTCACGAACAACCAGCAGTCCTATCAGAATCTCTTAGCTGCCCAACAGCAAGCCGCTGCTTCCGCTGCAAGTGCCGGTGCAAGTGCGAACTCTGCGACCGCCTCAGAGGCGTCCCGTCAGGCTTCTGCTGTGAGTGCCTCGCAGTCCTATGCAGATGCCAATCGGTCGAAGGCTGAGGCTGACCGTGCGAAGACTGAAGCGGACAAGCTGGGCAACTTCAACGCCCTCGGTGGTGCCCTGTCGTCCGTCAACGGGACTCAGGTCTTCTGGAAGGGTGAGCAGGTATCCATGAATGCTGGCTTCCAAGCTCGCACGGGTGCCGACAATGAGGCGAACTTCACGATGACCGATGGGAACGGCAACGACCCTATTCGTCTTGTTCGCACCTCTGACCGCCGAGTCCACCTTTATGGCAACGCCTCGGGTGACGGTGATCGGATGGTCTGGGGATCGACTGACGTGTCCACGCCTAAGAACTTCTCAGTGGGCGGTACGCTTGTCGCGAACGGTCAGGCGACATTCAACGGAAATGTGACCACGACTGGACTCACATCGACCGGTGAGATCGTGGCTAACGGAACCGTCCGCTCTAAGAGTGGCGTGGTCCAGTCGTTCGCCCCGAACCAATCTGCCAACTGTCACTTCTGGTTCTACGACAGCGTGGGCAACTCCCGTGGGGTTCTCTATGCGGACCAATCCGGTGTCGTCCGGGTACAGGCTGGTGGTGCCTTAACGGCGACCTTCGGGACCGATGGCGTGACTCAACTCAACGCCCTCAACGCCAACCGCTCTGGCGGTCAGTCGTACTTCTACAGCCCATATGCCCAGATCGACGGGGCCATGTATGGCACCTGCAACCTGCAACTACAAGGCACTGGTGGTGGCGTGGCTGCGCTGGGCTTCCACAACGCTGGCCGTGTGGCTGGTGCCCTGTGGCTGAACAACGACAACCAGCTTTGGTGGATGCAGAACTCTGGCAACAACGCCCAGATGACGACCAACCAGAACGTGATGAACCACATCGGCGGCATGACCGCTGACCAAGTGGGCTCTATCGCTTCCATGTACAACCAGTCGGGGACAAACCTCGGGATTGGTGGTGGTGTCGCTGGTGGCAGTCTGCGCTATGCCTCTCACAACAACGTGTCTGGGCAGGGCGGTTCCGGTTCGTGGCGCTGCCTCGGTTCGGGCAACAACGGCGGCGTGTGCAATTACGTCCGCTACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bdf1d9cba4e4c29ad4276cf4ffd878439050afa65f879baeb4ff8899c0efc39e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6866
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50