Protein

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Genbank accession
XEN39394.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,52
Protein sequence
MADLKSNSTVGGAPIWHKGNFPLSPVGDTLLYKTFKVYTEFDKPQAVDNDFVSKAAGGEYLKNVNFKEGLSFNDKAGAPIFIGVPKNTTAAATYTASIKLTGSFALETPDNKPFIIFNPIETFGPDIYRLTVMGDMIARQIYDESGRVFSPGNTPSKAQVGLGLVDNAKQVQLEQAAVQTMTGVLAAPNFISTNPATADNHVARFDQIVIKDSIQDFGYYS
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23886,68830 Da
isoelectric point:5,37875
aromaticity:0,10860
hydropathy:-0,15747

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEN39394.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,5671
Central domain 200 210 12 0,0196
C-terminal 211 221 10 0,9296
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BP13076
[NCBI] 		3241510 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN39394.1 [NCBI]
Genbank nucleotide accession
PQ118624.1 [NCBI]
CDS location
range 91980 -> 92645
strand +
CDS
ATGGCCGATTTAAAATCAAATAGTACAGTGGGCGGAGCTCCTATATGGCATAAAGGAAATTTTCCTTTATCTCCGGTAGGCGATACTCTGCTTTATAAGACTTTTAAAGTCTACACAGAATTCGATAAACCTCAAGCAGTAGATAACGATTTTGTTTCTAAAGCTGCTGGAGGAGAATATTTAAAAAACGTTAATTTTAAAGAAGGTTTATCATTTAATGATAAAGCTGGTGCTCCGATTTTTATTGGAGTTCCTAAAAATACTACGGCGGCAGCTACTTACACAGCATCTATAAAATTAACCGGGTCATTCGCTTTAGAAACTCCCGATAATAAACCATTTATCATATTCAACCCAATAGAAACATTCGGTCCTGATATATACCGTTTGACCGTCATGGGTGATATGATTGCTCGTCAAATTTACGACGAATCAGGTAGAGTTTTTTCTCCGGGAAATACTCCGTCTAAAGCGCAAGTCGGTTTAGGATTAGTTGATAACGCTAAGCAAGTTCAACTAGAGCAGGCCGCTGTCCAGACAATGACGGGTGTTTTGGCAGCTCCAAACTTTATAAGCACTAATCCGGCAACGGCTGATAATCACGTAGCTCGTTTTGACCAGATTGTAATAAAAGACTCAATTCAAGATTTTGGATATTATAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
28d844629ae48e7eb8d9f8cfc7d92a8ff72d34db371a7308f1ec2831047e6fd4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6331
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50