Protein

View in Explore
Genbank accession
WNV46656.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPTGYVGAQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELDLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQAINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:801 AA
molecular weight: 89963,43030 Da
isoelectric point:5,85325
aromaticity:0,11486
hydropathy:-0,38352

Domains

Domains [InterPro]
IPR058003
TTP
1–801
IPR058003
WNV46656.1
1 801
Architecture
TTP
TTP 1-801
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV46656.1
1 801
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9912
Central domain 144 342 200 0,0663
C-terminal 343 801 458 0,1662
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-342
C-terminal
343-801

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Sekstaphage-1
[NCBI] 		3076820 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Escherichia coli BW25113
[NCBI] 		679895 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV46656.1 [NCBI]
Genbank nucleotide accession
OR545379 [NCBI]
CDS location
range 23126 -> 25531
strand +
CDS
ATGGCTCTCATTAGTCAATCAATCAAGAACCTCAAGGGTGGTATCAGCCAACAGCCAGATATTCTCCGGTTCGCTGAACAAGGTAGCGTACAGATTAACGGTTGGTCTTCTGAGTCCGAGGGTCTCCAGAAGCGCCCACCGATGATTCACCTTAAGACCCTTGGCCCTACCGGGTACGTAGGTGCGCAACCTTACGTGCATCTTATCAACCGGGATGAGTTCGAGCAGTATTTCGTGGTGTTCACTGGTGAGGACATTAAGGTGTTCGATCTGGATGGTAAGGAGTACCAAGTACGTGGAGACCGCTCTTATGTGCGCACAGCTAACCCACGGGAAGACCTTCGGATGGTAACGGTGGCTGACTACACCTTTGTGACCAACCGTAAGGTGGTTGTGCAAAGTAACGACCAATCGGTCAACCTTCCGGGCTTTAAAGACCAAGGCGATGCATTAATCAACGTCCGTGGTGGACAATATGGGCGTAGACTCTCAATCGAGTTCAACGGGGCTGAGCGTGCTGCTGTTCAACTACCAGACGGCTCACAACCAGCACACGTCAATGAGGTTGACGGTCAGGCCATCGCTGAGAAGCTGGCGGCTCAGTTGCGGAATAACCTAGGGAACCCCAACAATGACCAAGACCCAAATAAGTGGCGGTTCAATGTTGGCCCCGGATTCATCCATATCCTTGCGCCAAATAACGATAACGTTTGGGGACTACAGACTAAGGATGGTTACGCAGACCAGCTAATCAACCCTGTAACCCATTACACTCAGTCGTTCCAGAAGCTGCCTATTAACGCGCCAGATGGGTACATTGTGAAGATTGTAGGTGACACCTCCAAGACTGCCGACCAGTATTACGTTAGGTTCGACCTCAACCGTAAGGTGTGGGTAGAAACAATTGGATGGAACACAAGGACTCACCTACATTACCACACGATGCCTTGGGCACTGGTACGTGCTTCTGACGGGAACTTTGACTTCAAGGTACTTGAGTGGGGTGCTCGTACTGTGGGTGATGATACAACTAACCCATACCCTTCCTTTACCGGACAGACAATCAACGATATTTTCTTCTTCCGCAACCGTTTGGGATTCCTTAGCGGGGAGAACATCATCTTGTCTCGCACCTCGAAATACTTCAACTTCTTCCCGGCCTCCGTGTCAAACTACTCCGACGATGACCCAATCGACGTTGCGGTTAGCCATAACCGGGTGTCAACCTTGAAGTATGCCGTTCCGTTCTCCGAAGAGTTGCTCCTGTGGTCTGACCAAGCGCAGTTCGTTCTGACAGCCTCTGGTATCCTATCGAGCCGCTCCGTAGAGTTGGACCTTACGACTCAGTTCGACGTGCAAGACAGGGCACGCCCACATGGTGTAGGGCGGAATGTATACTTTTCGTCACCTCGCGCTTCCTTCACATCCATTAACCGATACTATGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTTCCGAACTACATACCGAATGGGGTATTTAGTATCTCAGGAACAACTGCTGAGAACTTCGTGGCTATCCTTACGAGCGGTGCGCCGAACCGAGTGTATATCTACAAGTTCCTCTACATTGACGAGGAAATCAGGCAGCAGTCGTGGTCTCATTGGGACTTTGGGGACAACGTTACGGTGTTCGCAGCACAGGCCATAAACTCAACAATGACAGTATTGATGAGCAATGAACATGCTGTGTGGATGGGGCGCTTACACTTCACGAAGGACTCCATAGACCTTCCGGGAGAACCTTATAGGTTGTATATCGACGCTAAGAGAAAGTACACCATCCCTGCTGGGACGTACAACGATGATACCTACCAGACGTCAATAAGCCTCTCAACGATTTACGGGATGAACTTCACGAAGGGTAGGGTTTCGGTGGTCTTTCCTGATGGGAAGATTGTAGAGATAGACCAGCCAATCAACGGGTGGAGTAGCGACCCAATGCTGAGACTTGATGGGAACCAAGAGGGCCAAGTGGTTTACATTGGGTTCAACATCCCGTTCACTTATACGTTCTCGAAGTTCCTCATTAAGAAGACTGCTGAGGACGGCTCGACGGCTACCGAGGATATTGGTCGCTTACAGCTTCGGCGTGCGTGGGTAAACTATGAGGACTCTGGAGCGTTCACCATCCGTGTGAACAACCTGTCCCGTGAGTTCATCTACACAATGGCTGGTGCTCGCTTGGGTTCTGACAATCTGCGTGTTGGCAGGTCGAACATTGGCACAGGGCAGTACCGCTTCCCGGTGGTGGGTAATGCGCAGACGAACCTAGTAACTATCGAGTCCGATGCGTCTACCCCATTGAACATCATTGGGTGCGGCTGGGAGGGGAACTACCTTCGTCGTTCTTCGGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
70cf225f20678166848e5d3d6a8dd714c0fb770080199941e27d105bec39daac
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2980
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sekstaphage-1, isolated from a poly-specific therapeutic phage cocktail, is a close relative of T3 with an expanded host range Kotovskaya,O., Yarema,P., Skutel,M., Belova,V., Korostin,D., Severinov,K. and Isaev,A. 2024-12-11 — GenBank