Protein

View in Explore
Genbank accession
YP_009799776.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MALYRTGTAAMDAQGVITGTGTKWREPLSLIRTGATIVFLTSPLKLAVISDIVSDTEMKAIQTDGEPVENGNYVILLNDSLTVDGMAQDVAETLRYYQSKETVIEEAIEFFKNFDLKTLQDLVARAEASAQKTDADRAATEQLKNDTQTIKDAAVSETQQIKNAAVAETNQIKADTDAIKNQTQQIKDSAVTEITAIKNEAIDAKDLAWAAQEGAERAETAANNAQSGAETARDEARQWAQQVQPENLLHKDQNLLDIENKAAARGNLQVDSVRQSTGTTPGDYNAFTNPQMSYELRIANNGEWRVARNSDSATSALSVGAGGTGAGNVTQAKINFQIDRFNQFGSITSMVSGNKTRSVLVSDTGVWGGFNEESQSYIPLGVAQGGTGAGNVEGAKVNFGLERFKQTANETMMYGPGNSPYRITINNNNDWGVWNDAVGGWKPLGVAQGGTGSNNARGACDNINAMSAIVDGLQMDSPYLKSGIIYYGDGSHAGGSGAPFNYSYVLSLSENNGSVGNWTQVAFPILVNAAPKMRRRNANPALLSEWFNFVVQGLNATVDTNGFWKVASPIIKLMGDGTIETNDQSRGAEAVRVGRGVYEISGVLGFNSSPEWGGVDGGFVIPNNNNGLPLLWVDYEIKEDGGIIVKTYHRTHDNVPKFARNEIEGFSDGDPIDIPNGRWLDLRVEMPSDSEHNKMIEESLKSYEQNLNIDEK
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76917,16060 Da
isoelectric point:4,70601
aromaticity:0,07303
hydropathy:-0,44677

Domains

Domains [InterPro]
DC_0906
STR
1–712
DC_0906
Coil
Unmapped
116–136
Coil Coil IPR058008
YP_009799776.1
1 712
Architecture
STR
STR 1-712
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_PHB07
[NCBI] 		2136179 Uroviricota > Caudoviricetes > Drexlerviridae > Tlsvirus > Tlsvirus PHB07
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009799776.1 [NCBI]
Genbank nucleotide accession
NC_047947.1 [NCBI]
CDS location
range 12747 -> 14885
strand +
CDS
ATGGCTTTATATCGCACTGGTACGGCTGCAATGGACGCGCAAGGCGTTATTACTGGTACTGGCACAAAATGGCGTGAGCCGCTTTCTCTTATCCGCACTGGCGCAACAATCGTGTTTCTCACATCGCCTCTTAAATTGGCTGTGATTAGCGATATTGTAAGCGACACGGAAATGAAAGCGATCCAGACTGACGGCGAGCCAGTAGAAAACGGAAATTATGTGATCCTGTTGAATGACTCTTTAACGGTAGATGGAATGGCGCAAGATGTTGCGGAAACTCTGCGCTATTACCAAAGTAAAGAAACTGTTATTGAGGAAGCGATTGAATTTTTCAAAAACTTTGATTTAAAAACATTACAGGATCTTGTTGCTCGCGCTGAGGCTTCCGCGCAAAAAACTGATGCAGACCGAGCCGCGACGGAACAATTAAAAAACGACACGCAAACAATTAAGGATGCCGCCGTTTCTGAAACTCAACAGATTAAGAATGCCGCTGTTGCTGAAACCAATCAGATTAAGGCAGACACGGACGCAATAAAAAACCAAACGCAACAGATTAAAGATTCTGCCGTCACTGAAATAACAGCAATAAAGAACGAGGCTATTGACGCAAAAGATCTTGCATGGGCTGCGCAAGAAGGCGCTGAACGTGCTGAGACTGCTGCAAATAATGCACAATCTGGCGCTGAGACTGCGCGTGATGAAGCGCGTCAATGGGCGCAACAGGTACAGCCTGAAAATCTGCTGCATAAGGATCAAAATCTTTTAGATATTGAAAACAAGGCCGCTGCAAGGGGAAATTTGCAAGTTGATTCAGTTAGGCAATCAACAGGAACAACGCCAGGTGATTACAACGCATTCACTAACCCGCAAATGAGCTATGAATTACGGATCGCTAACAATGGCGAATGGCGCGTTGCAAGAAACAGTGATAGCGCGACATCTGCACTTTCTGTTGGAGCTGGCGGTACTGGTGCTGGGAATGTAACACAGGCAAAAATTAATTTTCAAATTGATAGGTTTAATCAATTTGGTTCTATTACATCAATGGTGTCAGGCAATAAAACAAGATCGGTTCTTGTTAGTGATACTGGCGTTTGGGGTGGCTTTAACGAAGAATCTCAATCATATATACCGCTTGGTGTGGCGCAAGGTGGTACTGGTGCTGGAAACGTAGAAGGAGCAAAGGTAAACTTTGGTTTGGAACGTTTCAAGCAAACAGCAAACGAAACTATGATGTATGGGCCTGGTAATTCTCCATACAGAATAACAATAAACAATAATAATGATTGGGGTGTATGGAATGATGCTGTAGGTGGCTGGAAACCGCTTGGTGTTGCACAGGGTGGTACAGGTTCTAACAATGCAAGAGGTGCGTGTGACAACATAAATGCTATGAGTGCAATTGTTGATGGTTTGCAAATGGATTCACCGTATCTAAAATCTGGTATAATTTATTATGGTGATGGTAGTCATGCTGGAGGTAGCGGCGCTCCATTCAATTACTCATATGTTTTATCGCTATCTGAAAATAACGGATCTGTTGGAAATTGGACGCAGGTTGCATTTCCAATTCTAGTTAATGCAGCACCTAAAATGCGTAGGAGAAACGCAAATCCAGCACTTCTTAGCGAGTGGTTTAATTTTGTTGTACAAGGACTTAATGCTACTGTTGACACTAATGGATTTTGGAAGGTTGCATCACCTATCATAAAACTAATGGGTGATGGAACAATTGAAACAAACGATCAATCAAGGGGTGCTGAGGCTGTTAGAGTTGGTCGTGGTGTTTATGAGATATCAGGCGTTTTAGGTTTTAATTCAAGTCCAGAATGGGGTGGTGTTGATGGTGGATTTGTTATTCCTAACAATAACAATGGATTACCTTTGCTTTGGGTTGATTATGAAATAAAAGAGGATGGAGGGATAATTGTAAAAACTTATCATAGAACACATGATAATGTGCCTAAATTCGCTAGAAATGAGATTGAAGGATTTTCTGATGGAGATCCAATTGACATACCTAATGGAAGATGGCTTGATTTACGTGTTGAAATGCCATCTGACAGTGAACATAACAAGATGATCGAAGAATCATTAAAAAGTTATGAGCAGAATTTAAATATTGATGAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a02ce028934d9f0930ed42222d6845a910b8c012275b6f0adf7a5936acc9b106
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7334
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three Siphoviridae Salmonella enterica serovar enteritidis bacteriophage show promising potential for phage therapy Chen,Y., Sun,E., Yang,L. and Wu,B. 2018-11 — GenBank