Protein

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Genbank accession
QIG71801.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MENVKYLENGSIQADIDGQTVIIPDDMGNRYRQMVLEWESQGNEISPYIPPRPTSDQINAERERRISKGISIEVTGVGSIPITGTTQDTRNLQSLFSVATSRISTGDTTTITPFRDANNATQNLTPGQIVELFLKSTAYVSYLYDKSWTIKAMDPIPYNFADDEYWTD
Physico‐chemical
properties
protein length:168 AA
molecular weight: 18894,73620 Da
isoelectric point:4,47069
aromaticity:0,08929
hydropathy:-0,53690

Domains

Domains [InterPro]
DC_1488
ATT
1–54
DC_1488 IPR025484
QIG71801.1
1 168
Architecture
ATT
STR
ATT 1-54 | STR 55-152 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM40
[NCBI] 		2509725 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG71801.1 [NCBI]
Genbank nucleotide accession
MN988522.1 [NCBI]
CDS location
range 175341 -> 175847
strand -
CDS
ATGGAAAATGTAAAATACTTAGAAAATGGGTCGATCCAAGCGGATATTGACGGTCAGACTGTAATTATTCCAGACGATATGGGAAATCGTTATCGTCAAATGGTTCTTGAGTGGGAGAGTCAAGGTAATGAGATTTCTCCTTACATTCCACCTAGACCTACCTCAGATCAAATTAATGCAGAACGTGAGAGACGTATTTCTAAAGGAATCTCGATTGAAGTAACTGGAGTAGGATCTATACCTATTACAGGTACAACACAAGATACCAGAAATCTTCAATCACTATTCTCAGTAGCTACAAGTAGGATCTCTACAGGTGACACAACAACAATTACACCTTTTAGAGACGCCAATAATGCAACCCAGAATCTTACTCCTGGTCAAATCGTTGAATTATTCTTAAAGTCCACTGCATATGTATCGTATCTTTACGACAAATCCTGGACGATTAAAGCAATGGATCCTATTCCTTATAATTTTGCAGACGATGAATACTGGACTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae583cfd2d7173cd85f2a356b6d0ca3858374573f2da1d6129666aabe1788ba7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9615
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank