Protein

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Genbank accession
XPQ47833.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MQETISISKGGIVVAETQHKMVLSTTEPNNGINLVRIRQGDVLTQKFVVEVVEHGKLKTFDGLVPFFINTTKFGENQPVEQKVQEYSPAQARLVYTLSEPDWQWGGENTAHFSFRSLNGDGTWSEQFSTQDFNYRVISGISRSRLRDSGYVWTFEDLLRKFKDYMNQGKSDWEQWLEDNREILENIDPGGTIINILNEAKGDYDSLADRLDDMQNKTFSIPIGAEQVPIRKDKNFYNNGSYKTIVPLNLDEVITQADKTKFNMGFMTDIHTDAHNMYTEPIDTKIKHERRWNIVGQFRSLEAFTDVMVYGGDNIDGYSGATAQGIYPYTAKERRAKNLHVAKRFASAATAGAKVPVILCQGNHETGKIPYSNDGRTPQDSLTGADLSKINNGSYGPVLFPEKKIAIYRINTDDFSDAVDSQGKFLEYSGYNQGESFPAGKLGQTQLDDFGRWLEQLDRSYHVIIAGHVPMERENDVANVTKFATLLDGFKQGISVTIDYSTLIGHNPNPIGPCTYNFATKGSGTVVAIFAGHWHYETVKQLGTTQIIVCTTGYCEPENYDTDKEAGFANVQIDTIKRTIKLQGVGHYTSRDFTY
Physico‐chemical
properties
protein length:594 AA
molecular weight: 66783,75280 Da
isoelectric point:5,48146
aromaticity:0,10774
hydropathy:-0,52710

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
16–140
G3DSA:2.60.40.3350 G3DSA:6.10.250.1350 DC_2263 IPR029052
IPR018913
ATT
19–163
IPR018913 Coil IPR029052
G3DSA:6.10.250.1350
ATT
141–205
G3DSA:6.10.250.1350 IPR004843
XPQ47833.1
1 594
Architecture
ATT
STR
ATT 16-205 | STR 206-588 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPQ47833.1
1 594
Domain Start End Length (AA) Confidence
N-terminal 1 328 328 0,7942
Central domain 329 527 200 0,5781
C-terminal 528 594 66 0,2306
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-328
Central
329-527
C-terminal
528-594

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage D2SVT
[NCBI] 		3404953 Viruses > unclassified bacterial viruses >
Host Acinetobacter baumannii AB5075
[NCBI] 		1116234 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPQ47833.1 [NCBI]
Genbank nucleotide accession
PQ554527.1 [NCBI]
CDS location
range 17792 -> 19576
strand -
CDS
ATGCAAGAGACTATATCAATTTCTAAAGGAGGGATAGTCGTGGCAGAAACGCAACATAAAATGGTCCTATCCACCACAGAACCAAATAACGGAATAAATTTGGTTCGGATTCGGCAAGGAGATGTTTTAACTCAAAAGTTCGTTGTTGAAGTGGTGGAACATGGCAAACTAAAAACATTCGATGGCCTAGTGCCATTTTTTATTAATACAACAAAATTTGGCGAAAACCAACCTGTTGAACAAAAAGTACAAGAATACAGTCCAGCACAAGCAAGGCTTGTTTACACGTTAAGCGAGCCTGACTGGCAATGGGGTGGTGAAAACACCGCCCATTTCAGCTTCCGATCACTCAATGGCGACGGAACTTGGAGTGAACAATTTAGCACGCAAGATTTTAACTATCGAGTCATTTCTGGAATATCAAGAAGTCGGTTACGTGATTCTGGCTATGTTTGGACTTTTGAAGATTTACTAAGAAAATTCAAAGATTATATGAATCAAGGAAAGAGTGACTGGGAGCAGTGGTTAGAAGATAATCGTGAAATACTGGAAAACATCGATCCAGGTGGTACGATTATCAACATTCTGAATGAAGCAAAAGGAGATTATGATAGCTTAGCCGATCGCTTAGACGATATGCAAAATAAAACTTTCAGCATTCCTATAGGCGCGGAGCAAGTGCCAATTCGTAAGGATAAAAACTTCTACAATAACGGGTCATACAAAACAATTGTTCCGTTAAACCTAGATGAAGTTATCACACAAGCGGACAAAACAAAGTTTAACATGGGGTTCATGACAGATATTCACACTGACGCTCACAATATGTATACAGAACCGATTGACACTAAAATAAAACACGAGCGTCGATGGAATATAGTCGGACAATTCCGATCGCTAGAAGCATTTACAGACGTGATGGTGTATGGTGGCGATAATATCGACGGATACAGCGGTGCGACAGCGCAAGGTATTTATCCTTACACGGCTAAAGAAAGACGTGCGAAAAATTTGCATGTAGCAAAACGATTCGCTAGCGCGGCAACAGCCGGTGCAAAAGTGCCGGTTATTCTGTGTCAGGGTAACCATGAAACTGGTAAAATCCCTTATTCAAATGATGGACGTACGCCACAAGATTCGCTGACAGGCGCAGACCTTAGCAAAATCAATAACGGCAGTTACGGCCCTGTGTTGTTCCCTGAAAAGAAAATCGCTATCTATCGAATCAACACGGACGATTTCAGCGATGCTGTAGACTCTCAGGGTAAGTTCTTAGAGTATTCGGGCTATAACCAAGGGGAAAGTTTTCCCGCGGGCAAATTAGGCCAAACGCAACTAGATGATTTCGGACGTTGGCTAGAACAACTCGACCGAAGTTATCACGTTATCATCGCTGGACATGTACCCATGGAAAGAGAAAATGATGTGGCAAATGTGACGAAATTTGCTACCTTACTAGACGGATTCAAACAAGGTATAAGCGTAACGATTGACTATAGTACGTTGATTGGTCACAACCCTAATCCAATAGGACCATGTACTTATAACTTCGCGACTAAAGGAAGTGGAACAGTCGTGGCAATCTTCGCTGGTCATTGGCACTACGAGACAGTGAAACAATTAGGAACAACGCAAATCATCGTTTGTACGACAGGTTATTGCGAGCCGGAAAATTACGATACGGATAAAGAAGCAGGATTTGCGAACGTACAAATTGATACCATAAAACGTACCATTAAATTGCAAGGTGTAGGGCACTACACAAGTAGGGATTTCACGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6815f3bcbf30a523acde1e479392280f3561c59ca3223b884a79a791d81a5710
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7497
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50