Protein

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Genbank accession
UGL62822.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MADLGAIGASYGLGSFRGPSPSAYSSYVRPSARQTAVPSPRPLIGRGFVRYRVPTAVPGTPSWAGGPRPVGAEPAAVYAVGGTVKQRLNGVDSPLANCLVRLYARRTGMPAGAALTGPDGSFRVGNLLPETAGFFAIAFDPDGAPVQNALIFDRLQALPSVPGRIRNPAPSFTVDVAVSTQLTTAYLVGAPTFSVSSGALPDGVALSSSGLLSGTPTTDGEAYSFTVTATGSIYGTASVTWSGEVAGGIGYLNTLNGRTGLANVWSGQVDDSNTVLPALPFQFPLFGLTFQNNIYISSNSHVDFGFGSSAYSGLSPTNPGRALLINAADRSYQNVFAGPVLSGACFLIRYEGSSNTGNSNDNLWEVGLYNDGSITVVTGTVPGSSSPNGAGTSNISDGTAWRSVTPPTFLSDRAYLGQPTGPGGNFVWTEITP
Physico‐chemical
properties
protein length:433 AA
molecular weight: 44441,94250 Da
isoelectric point:5,87314
aromaticity:0,09700
hydropathy:0,02032

Domains

Domains [InterPro]
DC_0374
STR
1–161
DC_0374 IPR015919 DC_0792
DC_2153
STR
154–249
DC_2153
IPR013783
STR
155–245
IPR013783
UGL62822.1
1 433
Architecture
STR
RBD
STR 1-249 | RBD 250-433
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL62822.1
1 433
Domain Start End Length (AA) Confidence
N-terminal 1 375 375 0,7390
Central domain 376 422 48 0,4271
C-terminal 423 433 10 0,1992
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-375
Central
376-422
C-terminal
423-433

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage MET13-T1
[NCBI] 		2886032 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas sp.
[NCBI] 		29446 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL62822.1 [NCBI]
Genbank nucleotide accession
OK275493.1 [NCBI]
CDS location
range 13075 -> 14376
strand -
CDS
GTGGCCGACCTGGGCGCAATCGGCGCTTCGTACGGGCTGGGGTCGTTCCGCGGGCCCAGCCCCTCGGCCTACAGCAGCTACGTCCGACCCTCGGCGCGGCAGACGGCCGTACCGTCACCCCGGCCCCTAATCGGGCGGGGCTTCGTGCGTTACAGGGTGCCGACGGCCGTGCCGGGCACCCCGTCCTGGGCCGGAGGCCCGAGGCCCGTCGGCGCCGAGCCTGCCGCGGTGTACGCGGTCGGCGGCACGGTGAAGCAGAGGCTGAACGGCGTGGACTCGCCGCTGGCGAACTGCCTGGTGCGCCTGTACGCCAGGCGGACCGGCATGCCTGCCGGCGCGGCCCTGACCGGCCCCGACGGGTCCTTCAGGGTCGGCAACCTGCTGCCCGAGACCGCCGGGTTCTTCGCGATCGCCTTCGACCCCGACGGTGCCCCGGTCCAGAATGCCCTGATCTTCGACAGGCTGCAGGCCCTGCCGAGCGTGCCGGGCCGCATCCGCAACCCCGCGCCGAGCTTCACCGTCGACGTGGCAGTGTCCACGCAGCTCACCACGGCTTACCTGGTCGGTGCCCCGACGTTCTCGGTCAGCTCCGGGGCCCTGCCCGACGGAGTCGCCCTCAGCTCCTCGGGCCTGCTGTCCGGCACCCCGACGACCGATGGCGAGGCCTACTCGTTCACCGTCACTGCCACCGGCTCCATCTACGGCACGGCCTCGGTGACCTGGTCTGGCGAGGTCGCCGGCGGCATCGGCTACCTGAACACGCTCAACGGCCGTACCGGCCTGGCCAACGTCTGGTCCGGCCAGGTGGACGACAGCAACACCGTGCTGCCGGCGCTGCCGTTCCAGTTCCCGCTGTTCGGCCTGACGTTCCAGAACAACATCTACATCAGCTCCAACAGCCACGTGGACTTCGGCTTCGGGTCGAGCGCGTACTCTGGGCTGTCGCCCACCAACCCGGGACGGGCGCTGCTCATCAACGCTGCCGACCGGTCCTACCAGAACGTCTTCGCCGGGCCCGTGCTGTCTGGCGCCTGCTTCCTGATCCGATACGAGGGCTCCTCCAACACCGGCAACAGCAACGACAACCTGTGGGAGGTCGGGCTCTACAACGACGGCAGCATCACGGTCGTCACCGGCACGGTGCCAGGCAGCTCGTCGCCGAACGGCGCGGGCACGTCCAACATCTCGGACGGCACCGCCTGGCGCAGCGTCACGCCGCCCACCTTCCTCAGCGACAGGGCCTACCTCGGTCAGCCGACCGGGCCCGGGGGCAACTTCGTATGGACGGAGATTACGCCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
373165e8fa8d0b01cda64d487cf22debe731b90815f33efed9471858d32d7471
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7461
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50