Protein

View in Explore
Genbank accession
YP_001285545.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALYRTGTAAMDAQGVIIGTGTKWRDPLSLIRTGATIVFLTSPLKLAVISDIVSDTEMKAIQTDGEPVENGNYVILLNDSLTVDGMAQDVAETLRYYQSKETVIEEAIEFFKNFDLKTIQDLVARAEASAQKTDADRAATEQLKNDTQTIKDDAVTETQQIKDTAVNETQRIKDAAVAETNQIKADTDAIKNQTQQIKDSAVTEITVIKNEALDARDEARQWAQQVQPENLLHKDQNLNDLANKDLAREALKVEAVNSVKDQDTGAYNSFRNPAWTYELRIANNGEWRVARNDNNSTSALSIGAGGTGAENVTQAKINLQVDRIIQDSVFTSMLSPDGLKEISVRNDGTWGMFNRDLKGWSALGIEQGGTGATTVAKARENLLVDQVDRLGEQTLLWAPDKDTYFFVYSAGDWGVFDRSAGVRKALPIVSGGTGADNVAQARRNLGVGIDQDVTFNAVWAKAYYGQGGAWTAAVIKEKSQQASDGSNLLTYIENSWFGIQNYLVGTPGQAYQYVWSFNTFGGNVVWYSMRNDNGFYTPEGRCAIQGSDVRIKDRFEPPKPGAWDRVKQIGVMEFYYKGNHVLQRGYLAQQMAEIDDTYVFFGGTATDENGDEFEIMNVNDRAVISDLIVVVQELQGKNEALESEVSSLKADIEQLKKMVAGLAGGNAETIPELP
Physico‐chemical
properties
protein length:674 AA
molecular weight: 74102,57700 Da
isoelectric point:4,62865
aromaticity:0,08012
hydropathy:-0,41395

Domains

Domains [InterPro]
DC_0313
STR
1–672
DC_0313
IPR030392
CHP
547–645
IPR030392
Coil
Unmapped
624–658
Coil
YP_001285545.1
1 674
Architecture
STR
STR 1-672 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Tls
[NCBI] 		2892339 Uroviricota > Caudoviricetes > Drexlerviridae > Tlsvirus > Tlsvirus TLS
Host Escherichia coli B
[NCBI] 		37762 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001285545.1 [NCBI]
Genbank nucleotide accession
NC_009540.1 [NCBI]
CDS location
range 32060 -> 34084
strand -
CDS
ATGGCTTTATATCGAACTGGTACGGCTGCAATGGACGCGCAAGGCGTTATTATTGGTACTGGCACAAAATGGCGTGATCCTCTTTCTCTTATCCGTACTGGCGCAACAATCGTATTTCTCACATCGCCTCTTAAATTGGCTGTGATTAGCGATATTGTAAGCGACACGGAAATGAAAGCGATCCAGACTGACGGCGAGCCAGTAGAAAACGGAAATTATGTGATCCTGTTGAATGACTCGCTAACTGTCGATGGAATGGCGCAAGATGTAGCGGAAACGCTGCGTTATTACCAAAGTAAAGAAACTGTTATTGAGGAAGCGATTGAATTTTTCAAAAACTTTGATTTAAAAACAATACAGGATCTTGTTGCTCGCGCTGAGGCTTCCGCGCAAAAAACTGATGCAGACCGAGCCGCGACTGAACAATTAAAAAACGACACGCAAACAATAAAGGATGACGCTGTTACTGAAACGCAACAGATTAAGGATACCGCTGTTAATGAAACGCAACGGATTAAAGATGCCGCTGTTGCTGAAACCAATCAGATTAAGGCAGACACGGACGCAATAAAAAACCAAACGCAACAGATTAAGGATTCTGCCGTTACTGAGATAACCGTAATTAAAAATGAAGCGTTAGACGCGCGTGATGAAGCTCGCCAATGGGCGCAACAGGTGCAACCTGAAAATCTGCTGCATAAGGATCAAAACCTTAATGATCTTGCAAACAAAGACCTTGCAAGGGAAGCTTTGAAAGTTGAGGCTGTTAATTCTGTAAAAGATCAAGATACTGGCGCTTACAACTCTTTCCGAAATCCTGCATGGACTTATGAATTGCGGATCGCTAACAATGGAGAATGGCGAGTTGCACGTAATGACAACAACAGCACATCGGCACTTTCTATTGGCGCTGGCGGAACTGGTGCTGAAAACGTTACGCAAGCAAAAATAAATTTGCAAGTTGATAGAATAATTCAGGATTCTGTTTTTACGTCAATGCTTTCTCCAGATGGTTTAAAAGAGATATCTGTAAGGAATGATGGCACATGGGGTATGTTCAATCGCGATCTAAAAGGTTGGTCGGCTCTAGGTATTGAGCAAGGTGGTACTGGTGCAACAACTGTTGCAAAAGCTCGTGAAAACCTGCTTGTTGACCAGGTTGATAGACTTGGAGAACAAACGTTACTTTGGGCACCTGATAAAGACACTTATTTCTTCGTTTACAGCGCTGGTGATTGGGGGGTTTTTGATCGCTCCGCTGGAGTAAGAAAGGCGCTACCAATCGTATCTGGTGGCACTGGTGCTGATAATGTAGCTCAAGCAAGACGAAATTTAGGGGTTGGAATTGATCAGGATGTTACATTTAATGCGGTATGGGCTAAGGCTTATTACGGTCAAGGCGGCGCTTGGACTGCTGCTGTAATAAAGGAGAAATCACAGCAAGCAAGCGATGGCTCAAACCTTCTTACGTATATTGAGAACTCATGGTTCGGAATTCAAAATTATTTGGTTGGTACTCCTGGGCAGGCGTATCAATATGTTTGGTCTTTTAACACATTCGGCGGTAATGTCGTATGGTATTCAATGAGAAACGATAATGGATTCTATACACCAGAGGGGCGATGCGCTATTCAAGGATCTGATGTTCGCATTAAGGATAGATTTGAACCTCCTAAGCCTGGCGCATGGGATCGCGTTAAACAGATTGGTGTTATGGAGTTTTATTATAAGGGAAACCATGTTTTGCAGCGTGGATACCTTGCGCAACAAATGGCTGAAATAGACGACACTTACGTTTTCTTTGGCGGCACTGCAACAGATGAAAACGGTGATGAATTCGAAATCATGAACGTTAATGATCGCGCCGTTATTTCTGATCTTATTGTTGTTGTTCAAGAGTTGCAGGGTAAAAATGAAGCGTTAGAAAGTGAAGTTTCAAGTTTAAAAGCTGATATTGAACAATTAAAAAAAATGGTTGCTGGATTGGCTGGAGGTAATGCCGAAACGATTCCAGAACTACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
296ba4ee7e43585f8175331fa8e8f390be9cbc592e5d0286f48f8a782aa0afcd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The TolC and LPS Specific (TLS) Bacteriophage Genome German,G.J., DeGiulio,J.V. and Misra,R. 2024-09-01 — GenBank