Protein

View in Explore
Genbank accession
AOQ26845.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MPILNPDQGSGGGSVTSGGFLLGSPDNIFGLTSGDVSSSPSPSPAPDLVTAEGVRDSYFTTNPTKLTQYEDNPALGIYVYYTDGGSNIILGQSLVSGEWIINNSIVGIQGQNGTDGIAYEFANATERDTFFTNRPDLLRQGMPITITVEGTTVANNVWVGETAPVVYNPVVDNVQWVNASFRAGTASFELGDIHKISSGGENVFFINSNSNTAYFPPWQGHGDHSDPATRRVDSRPYTRSYSEYMVLETGGVVSPTGSVNYDVGFTLTANETVYGIKTISAETYTGELEYKRFSSDDKEVYSQKRSLSLTEGDEVEFWFEFPVENRAGESFTTKIMKPNGDLFLVRPTLNNLLDPYVEIRYRLFYDRIMMVEKDHEITPKNADFAAENARMYAVDTSSNTVTINATSSALNSFSVFDSHKRFNSNSCFVNFGGNVFELDTRNDYFRFFRDVSGNWRYQDIDQDDARSI
Physico‐chemical
properties
protein length:468 AA
molecular weight: 51799,25130 Da
isoelectric point:4,50991
aromaticity:0,12179
hydropathy:-0,40256

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOQ26845.1
1 468
Domain Start End Length (AA) Confidence
N-terminal 1 255 255 0,8695
Central domain 256 454 200 0,1085
C-terminal 455 468 13 0,9864
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-255
Central
256-454
C-terminal
455-468

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage S4-7
[NCBI] 		1873905 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOQ26845.1 [NCBI]
Genbank nucleotide accession
KX507046 [NCBI]
CDS location
range 84931 -> 86337
strand +
CDS
ATGCCTATTTTAAATCCTGACCAAGGAAGTGGTGGAGGTAGTGTCACTTCTGGTGGATTCCTCCTTGGTTCGCCTGATAATATATTCGGACTAACAAGTGGAGATGTAAGTTCTTCACCTTCACCATCTCCTGCACCTGACCTAGTTACTGCAGAAGGTGTTCGTGACAGTTATTTTACCACTAACCCCACTAAACTTACTCAATATGAGGATAACCCTGCACTAGGTATTTACGTATACTACACTGATGGTGGTTCTAATATCATTTTAGGGCAATCCCTTGTTTCTGGTGAGTGGATTATTAATAACTCTATTGTTGGTATACAGGGTCAAAATGGTACAGATGGTATTGCTTATGAGTTTGCTAATGCAACTGAGCGCGATACTTTCTTCACCAATCGACCAGATTTACTTAGACAAGGTATGCCTATCACCATCACGGTAGAAGGTACTACTGTTGCTAACAATGTTTGGGTTGGTGAGACAGCCCCTGTTGTGTATAACCCTGTTGTGGATAATGTCCAATGGGTTAATGCTTCATTTAGGGCAGGTACAGCTTCTTTCGAACTGGGGGATATCCACAAGATTTCCTCTGGTGGTGAGAACGTATTCTTTATTAACAGTAATTCTAATACAGCATATTTCCCTCCTTGGCAAGGACATGGTGACCACTCTGACCCTGCTACACGTAGAGTAGATAGTCGTCCTTACACTCGTTCTTACAGTGAATACATGGTACTTGAAACTGGTGGTGTTGTTTCACCTACTGGATCAGTTAACTATGATGTTGGTTTTACCCTGACGGCTAATGAAACTGTTTACGGAATCAAGACTATCTCTGCTGAAACCTACACTGGTGAGTTAGAGTATAAGAGATTCTCGTCAGATGATAAAGAAGTGTATTCGCAAAAGAGAAGCTTGTCATTAACTGAAGGGGATGAAGTTGAATTCTGGTTTGAATTTCCTGTAGAGAATAGAGCAGGAGAAAGTTTCACAACTAAAATAATGAAACCTAATGGTGATTTGTTTTTAGTAAGGCCAACACTTAATAATTTATTAGACCCTTATGTAGAAATACGTTATCGTCTATTTTATGACCGTATCATGATGGTTGAGAAAGATCATGAGATCACTCCTAAGAATGCAGACTTTGCTGCTGAGAATGCTCGTATGTATGCTGTGGATACCTCATCTAACACGGTAACCATTAATGCTACATCTTCTGCATTGAATAGTTTCTCTGTGTTCGATTCTCATAAGAGGTTCAATTCAAACAGTTGTTTCGTTAACTTCGGTGGTAATGTTTTTGAACTAGACACTAGAAATGACTACTTTAGATTCTTCCGTGATGTAAGTGGAAACTGGAGATACCAAGATATTGACCAAGATGATGCGAGGAGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c11f783806f99c80e492d03faf4e7a9f4884b61c1d2fe456bd0f1488be024c1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5346
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of bacteriophages S4-7 and 2E-1, infecting the marine pathogen Vibrio anguillarum Rorbo,N., Castillo,D. and Middelboe,M. — — GenBank