Protein

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Genbank accession
GENB_10e4142914c5 [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRRTQVARGINLAVIDGTTLALLDYKAFDMYGDPATNGNAIKDYLNSLPANRIVCFYTFDAIKSDDNFLATMRKIGSVAWPETRFFNIPITTTNYSHRSSYSAIYSSTMKKICMENFVGGAGSLKDNTTSFVEVVFDEFSDIGVTGIPERMVDDVQTYQNSGDLYGFHLYGLWGIGSDVYQGDIFKFTGELYCSQELRDAGGEVHLYMWTENSIGQWTSSSILRTTGLAPDQWHSLSGYFTIPNDAVNVRMGSQVYHYPSTVKVGLAQCRNVQITKVPREEINRNGAAVGVNGVRMQTLSEVDASGNENPIDKLLSLPVSPTGVASDKKIISHNFAELDYIVSDPVEYTSTNTAEYQFKEWTATRQAEVTKASLSSYGLKAGDTIRMQCQMKRDANAIANNKGAYIVMQFWDANNTYITGINMLDVGTIPNVYSFYKNEGVIPAGAVTFDFGLYRYPSNTNIGTVSAKDVKLSIVR
Physico‐chemical
properties
protein length:530 AA
molecular weight: 58466,91200 Da
isoelectric point:5,17374
aromaticity:0,10943
hydropathy:-0,20189

Domains

Domains [InterPro]
DC_0004
STR
1–530
DC_0004
PS52031
LEC
24–205
PS52031
IPR039477
STR
62–132
IPR039477
GENB_10e4142914c5
1 530
Architecture
STR
STR 1-530
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_10e4142914c5
1 530
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,2678
Central domain 74 272 200 0,5822
C-terminal 273 530 257 0,4853
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-272
C-terminal
273-530

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage CYPEBC003
[NCBI] 		3397586 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
PV067056.1_CDS_[89826..91418] [NCBI]
Genbank nucleotide accession
PV067056.1 [NCBI]
CDS location
range 89826 -> 91418
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
10fb201a52e6383a495c0acaf98ba3726811783c6ff411c33cb4b72355626bb8

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6326
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50