Protein

Genbank accession
ACL54838.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MSGTRAPKTIVVYDITGQTDYTIPFEYLARKFVVVTLIGQDRKVLTLNTDYRFTTKTTIGLSDPSPVGYDKIEIRRFTSATDRLVDFHDGSILRAYDLNLSQIQTLHVAEEARDLAGDSIAVDDNGDLDARGRKIVNLADAENDTDAVNYGMLKKFDNSTFNNAKRAEDSANAAKVSENKAKNSELRSIEAEAKCLSSAGTAMTAAADANRSKEAAEDAEQVVVPLVPIVEKASQDAAKAAADAAQAVQDVKDLGAVPIGSIFPFVKTPPAGYLTCDGSTFSKDEYPDLYAYLGSTTLPDMRGRYLKMPSDLANIYQKFPAIIPALLHDVDISHTHTASQQAHAHDRGTMEIGGEFFVGSGRGLYIATGAYGGAFFSDSPGGADNHGGGASGGLNRRWVFRASRNWTGLTSYSAPAITVNALTNAIRQTTNMRLQNSNPDIQIGSALEVKHMTVVYAIKAAGKVADEGLMEVTQIKKDFAERLPRGDSVYDNRTWVKIAQVAGSSSSAGDFINFQVSGGHDFGSSIGAFSAYVMMQERNNTLTMKITQLSSGLSNPEFYTRKIDEFKYELWMKRTTTFPSPITINRLNMSRYSDTDAKIFEVTSTQPSGVLTKVDVIEQDVLLKKIQEYPTEWSAVEPETGSSSSVRWIRAGVWGDNVGETKWRYLDGKTIEVVGIIRVKSFQSANTYNVLKLPTGKTLSSLGNFFQPVQGNHVNLIPSYAEGSLNSDIISIISTADTDLGTFFFINWTIPLN
Physico‐chemical
properties
protein length:753 AA
molecular weight: 82082,07590 Da
isoelectric point:5,56064
aromaticity:0,08765
hydropathy:-0,27835

Domains

Domains [InterPro]
IPR005604
7–130
IPR005604 SSF88874
IPR037053
255–308
IPR037053
IPR011083
260–305
IPR011083
ACL54838.1
1 753
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP3
[NCBI] 		588068 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACL54838.1 [NCBI]
Genbank nucleotide accession
FJ217960.1 [NCBI]
CDS location
range 1 -> 2262
strand +
CDS
ATGTCAGGCACTCGTGCTCCTAAGACTATTGTGGTTTATGATATCACAGGTCAAACAGACTATACGATTCCCTTCGAGTATCTTGCTCGTAAGTTCGTAGTGGTTACTCTTATTGGTCAAGACCGTAAGGTTCTGACTTTAAATACCGACTATCGGTTTACTACAAAGACGACTATCGGTCTATCAGACCCAAGTCCTGTAGGTTACGATAAGATTGAGATTCGTCGATTCACTTCAGCTACTGACCGTCTTGTAGATTTTCATGATGGTTCTATTCTTCGTGCATACGATTTGAACCTTTCACAGATTCAAACTCTTCATGTTGCTGAGGAAGCTCGTGACCTTGCAGGTGACTCTATTGCTGTTGATGATAATGGTGACTTAGACGCCCGTGGTCGTAAGATTGTTAACCTTGCCGATGCAGAGAATGATACCGATGCGGTAAACTATGGTATGTTGAAGAAGTTTGATAACTCGACTTTCAACAATGCTAAAAGAGCTGAAGACTCTGCTAATGCAGCTAAAGTTTCTGAAAACAAAGCTAAGAACTCAGAGTTACGTTCTATTGAAGCTGAGGCTAAGTGTCTATCTTCTGCTGGTACGGCTATGACTGCTGCTGCTGATGCTAATCGTTCTAAAGAAGCTGCTGAAGATGCGGAACAGGTAGTTGTACCTTTAGTCCCAATCGTAGAGAAAGCCTCTCAGGATGCTGCTAAAGCTGCTGCTGATGCTGCTCAAGCGGTACAGGACGTTAAAGACCTTGGTGCTGTTCCTATTGGTTCCATCTTCCCGTTCGTTAAGACACCTCCTGCTGGTTATCTGACGTGTGATGGTTCTACCTTCTCTAAGGACGAATATCCTGATTTATATGCATATTTAGGTTCTACTACATTACCAGATATGCGTGGTCGTTATTTGAAGATGCCAAGTGACTTAGCTAACATCTATCAGAAGTTTCCTGCGATTATTCCTGCGTTGCTTCATGATGTTGATATTTCGCATACACATACAGCCTCTCAGCAGGCTCATGCGCACGATAGAGGTACTATGGAAATCGGTGGTGAGTTCTTTGTTGGTTCTGGTCGTGGCCTCTATATCGCTACAGGTGCTTATGGTGGTGCATTCTTCTCGGATTCCCCAGGTGGTGCTGATAATCATGGTGGTGGTGCAAGTGGTGGTCTTAATAGACGTTGGGTATTTAGGGCTTCAAGAAACTGGACAGGATTGACATCTTATAGTGCTCCTGCAATTACAGTTAATGCCTTGACTAATGCAATCCGTCAGACAACCAACATGCGTCTTCAGAACTCTAACCCTGATATTCAGATTGGTAGTGCTCTTGAAGTTAAACACATGACGGTCGTCTATGCGATTAAAGCTGCTGGTAAGGTTGCTGATGAAGGTCTGATGGAAGTCACTCAGATTAAGAAAGATTTTGCTGAGAGATTACCACGAGGAGATTCTGTTTATGATAATAGAACTTGGGTTAAAATTGCTCAAGTAGCTGGAAGTTCCTCTTCGGCTGGGGACTTCATCAATTTCCAAGTTTCAGGTGGACACGATTTTGGTAGTAGTATAGGAGCGTTCTCTGCTTACGTAATGATGCAAGAGCGTAATAATACATTAACTATGAAAATCACTCAGTTATCATCTGGTCTAAGTAATCCAGAATTTTATACTCGTAAGATTGACGAATTTAAATACGAGCTTTGGATGAAACGTACTACAACTTTCCCCTCACCTATCACAATCAACCGACTAAACATGTCTCGGTATAGTGATACTGATGCCAAAATCTTTGAGGTTACTTCTACACAGCCTTCTGGTGTTTTAACTAAGGTAGATGTAATTGAGCAAGATGTTTTACTGAAAAAGATTCAGGAATATCCTACTGAGTGGAGTGCTGTAGAACCGGAAACAGGAAGTTCTTCTTCGGTTCGATGGATAAGAGCAGGTGTTTGGGGAGATAATGTAGGAGAAACTAAATGGCGTTATCTTGATGGTAAGACGATTGAAGTGGTTGGTATTATCCGTGTGAAATCATTTCAATCAGCTAACACGTATAATGTCTTGAAACTACCGACTGGTAAAACTTTAAGCTCACTTGGTAACTTCTTCCAACCAGTACAAGGGAATCATGTTAATTTAATCCCAAGTTATGCAGAAGGAAGCCTAAATAGTGATATTATTTCAATAATATCAACAGCAGATACTGATTTAGGGACATTCTTCTTCATCAACTGGACTATCCCTTTAAATTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
261ce50249e8ef99e121c96b682400f8e9072e790647e4a1a4b4b37ca1c1ccae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6075
Evidence 0,6075
Download PDB

Literature

Title Authors Date PMID Source
The core oligosaccharide and thioredoxin of Vibrio cholerae are necessary for binding and propagation of its typing phage VP3 Zhang,J., Li,W., Zhang,Q., Wang,H., Xu,X., Diao,B., Zhang,L. and Kan,B. 2009 19201789 GenBank