Protein

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Genbank accession
AGF89740.1 [GenBank]
Protein name
gp58-like protein
RBP type
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLSLLDKTVRTAKWHGKPLPETIKASVKETLNGDFVLNFTYPITDSGLFRELKEDYLVRSPVPVLGHQLFRIKKVIEGDTSLEVVAYHISDDIMTRLVSQFRCEQVPCATALSSMVMASKSPLGDFSFTSDIVKNRTYTTDKEQTLYSSLMDGKHSILGTWEGELVRDNLALTIKGERGQDRGVVISTHYNLKKYQRTKESTQIITRIHATSSFKQEGQDRETVLQVTVDSPLINSYPFINEVTYTNNNLKTRQELIEWASSKFRLEGIDKPKDAIIIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKAIAYDYDPLAKNYRSITFDDKASIGTGKTGGSITTLANNLIDGNKRSEDVAVEIALENANKAFDAEFEKRQVAIDNAIEQAQSHGEVYADRLKASIDNELSSIHQQMRQHEEEQQRTTRDLMAKAGVNTNLATEAKQKAEQAQTGATEALRRAEQAKLDAIQEANRLTSTERSQTELKIATAKSQAISEASRLVDVAKALLGGQLATVSTNLSQTKEDIKLLASKQLVDSLTGRVTGAESMIQVQADQISQRVKTSDFNQAKQRIETAESTITQLGNRITTEISQVDSKIPTSLDGLNLMTGTRDWSNKGNAWHLGNNWSTETENFRGLVVRSTQAGFNGSHQNIVVKAGDVITFSFYAKANQPLSSIKVSAIWTGSSVYRAPVARVRESDDIISVTSDWKRYWKTVHVLSDGSLQFRTEYNASTIPNGNKFYVAGLKVAKTSLDTGYSENPADIAGELTTQRTLITQTASGVEQVSTRLTEASGKISSSETQIRQLVSDVSSKVSQTDFNNLKRTVEGHTTSIQQTQQSILLKADKTVLEGVKTTADNALAKANTNASQITQTKADLRIANDSISQKVAKTDFNNLSGRVASAETTIRTQAGQIEQRLTSTQVESAINSKGYQTKSQVDSNITGRGYLTSSSLQPYATTTSVQNLVRTTSDSFTQRISQTESRIPTSVSHRNLIAGTSDRWGAYQTINASSNWIASLGRVQFGDGSGIYVGSKVHLYVHISADEITFDPAVTTRTMKLQGPILDSQNVRTWTNWNLYHPFYNKWSSNLTTGNNYRLIKLTATVTQEMYQHSKGFELQVRIDGVKTGKFHVRALMVSTGDIFPDYWTPSLDDFTTVTAFHEVRDTVSSHTRTIGDHTNQISQVVQTATGIVTRVGNLETSRATMAAVNAIQTQVSTLAGSWSVRNLTSAGTVLSQLNLNKDGTVKIDGKLVQITGTTYIQDGVIASGKIASLDAGKITSGIISAARIGAEAITADKLKVDQAFFTKFMATEAYLKQLFAKSAFITQVQSVTLSANKISGGILSAINGAMKINLSLGNIKFFTNSPSISREVSGYPHQWVSFETGTSNGKPCGVTIIGSNRWNNWNANDGGFVGIRAWNGTDTDQIDVVGDKVRLASAPYTNPDGWEIVTLPNRLSIDAYKASDRPSSILNIGDIRIYRNGTTYVSLKDVLHQFNHNFKHLVNITGRGDVILTWDTIK
Physico‐chemical
properties
protein length:1515 AA
molecular weight: 166480,63920 Da
isoelectric point:8,90755
aromaticity:0,06733
hydropathy:-0,38436

Domains

Domains [InterPro]
DC_1274
ATT
1–645
DC_1274 DC_0171
IPR007119
Unmapped
27–327
IPR007119 Coil Coil Coil DC_0899 IPR012892
IPR010572
ENZ
131–328
IPR010572
AGF89740.1
1 1515
Architecture
ATT
STR
RBD
ATT 1-645 | STR 646-860 | RBD 861-1513 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage phiD12
[NCBI] 		1289600 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus suis D12
[NCBI] 		1004952 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus suis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGF89740.1 [NCBI]
Genbank nucleotide accession
KC581799 [NCBI]
CDS location
range 7324 -> 11871
strand -
CDS
GTGCTATCATTATTAGACAAAACGGTTCGAACGGCAAAATGGCATGGGAAACCACTCCCAGAGACTATAAAAGCAAGCGTTAAAGAAACCTTGAATGGGGATTTTGTCCTGAATTTTACCTATCCAATCACAGACAGCGGTCTATTTCGAGAGCTAAAAGAGGACTACCTTGTTCGTAGTCCAGTTCCAGTATTGGGACACCAGTTGTTTCGGATAAAGAAAGTAATCGAAGGAGACACCAGTCTTGAAGTTGTGGCCTATCACATATCAGATGACATCATGACTAGGTTGGTATCTCAATTTAGGTGTGAACAGGTTCCCTGTGCAACAGCTCTATCAAGCATGGTCATGGCAAGCAAGTCTCCACTGGGAGATTTTTCATTTACCAGTGACATTGTCAAGAACAGAACCTATACAACGGACAAGGAACAGACGCTGTACTCCAGCCTGATGGATGGTAAACATTCTATTCTTGGAACTTGGGAGGGTGAACTGGTTCGTGATAACCTTGCCCTAACTATAAAGGGTGAGCGGGGACAAGACCGTGGGGTAGTCATCTCTACTCACTACAATTTGAAGAAGTATCAACGAACCAAAGAAAGTACACAGATTATCACTCGTATCCATGCCACTTCAAGCTTTAAACAAGAGGGGCAGGATAGGGAAACTGTACTTCAAGTCACAGTAGACAGTCCGTTGATAAACTCCTATCCTTTCATCAATGAAGTAACCTATACCAATAATAATCTCAAAACTCGACAGGAGTTAATAGAGTGGGCTAGTAGCAAGTTTCGCTTAGAGGGAATTGATAAGCCAAAAGACGCCATCATCATTGAGGCATTTGAGTTAGATGGTCAAACTGTTCATCTAGGCGATACAGTGACTTTAAAAAGCAAGCTACACGGCATTGATGTGAGGAAGAAAGCCATCGCTTATGATTATGATCCTTTAGCTAAGAATTACCGCTCTATCACTTTTGATGATAAGGCAAGTATTGGCACAGGTAAAACTGGTGGGAGCATAACTACACTAGCAAATAATCTCATTGATGGGAATAAGCGGAGTGAGGATGTTGCCGTTGAAATTGCTCTTGAGAATGCCAATAAAGCCTTTGATGCAGAATTTGAGAAACGTCAAGTAGCCATTGATAACGCTATTGAACAGGCTCAAAGTCATGGGGAGGTTTATGCGGATCGATTAAAGGCCAGCATTGATAATGAACTTAGTTCTATTCACCAACAGATGCGGCAACATGAAGAGGAGCAGCAACGTACAACTCGTGATTTAATGGCAAAGGCTGGGGTAAATACCAACCTAGCAACAGAAGCCAAACAAAAGGCGGAACAGGCTCAAACTGGGGCAACTGAAGCTCTCAGAAGGGCAGAACAAGCCAAACTTGATGCCATTCAAGAAGCTAACCGATTGACTTCAACGGAGCGTAGCCAAACAGAGTTAAAGATTGCGACAGCAAAATCACAAGCTATCTCTGAAGCCAGTCGATTGGTTGATGTAGCAAAAGCTCTATTAGGTGGGCAGTTGGCAACTGTAAGTACCAATCTCTCACAAACCAAGGAGGATATAAAACTTCTTGCGAGTAAGCAACTGGTGGATAGTCTGACTGGTCGAGTAACGGGTGCAGAATCCATGATTCAAGTGCAAGCAGACCAAATTTCCCAGCGTGTAAAAACCAGCGATTTTAACCAAGCAAAACAGAGAATCGAAACTGCAGAGTCAACGATTACGCAATTGGGGAATCGCATAACAACTGAAATCAGTCAAGTGGATTCGAAAATTCCAACTAGCCTAGATGGCTTAAATTTGATGACTGGTACTCGTGATTGGTCGAATAAAGGAAATGCCTGGCATTTAGGAAACAACTGGTCTACCGAAACAGAGAATTTCAGAGGACTGGTTGTTCGTTCAACCCAAGCAGGGTTCAACGGAAGTCATCAAAATATTGTTGTGAAAGCTGGAGATGTCATTACTTTTAGCTTTTATGCCAAAGCGAATCAGCCACTTTCTTCCATCAAAGTTTCAGCGATTTGGACTGGTTCGAGTGTCTATCGTGCTCCAGTCGCAAGAGTGAGGGAATCGGACGATATTATATCTGTCACCAGTGACTGGAAACGCTACTGGAAAACAGTTCATGTCTTATCTGATGGCTCACTCCAATTTCGAACGGAGTACAATGCAAGCACAATCCCAAATGGGAATAAATTCTATGTTGCAGGATTGAAAGTCGCAAAGACCTCACTAGACACAGGTTATTCAGAAAATCCAGCAGATATAGCTGGTGAATTGACCACCCAACGGACACTCATCACTCAAACGGCTTCTGGTGTAGAGCAGGTTTCTACAAGATTAACCGAGGCGAGTGGAAAGATTTCTAGTAGTGAAACACAGATTCGACAATTAGTTTCGGATGTATCCTCAAAGGTCAGTCAGACGGATTTCAATAACTTGAAACGAACTGTTGAGGGACATACTACATCCATCCAACAGACGCAACAATCTATTTTGCTTAAGGCTGATAAGACAGTTCTTGAGGGGGTCAAAACAACCGCTGACAATGCCTTGGCTAAGGCCAATACAAACGCAAGTCAGATTACTCAAACAAAGGCAGATTTAAGGATTGCCAATGACTCCATTTCACAGAAAGTCGCAAAGACTGATTTTAATAACTTGAGCGGTCGAGTAGCAAGTGCAGAAACCACTATCCGAACACAGGCTGGGCAAATTGAACAACGACTAACAAGTACGCAAGTTGAATCTGCCATTAACTCAAAAGGCTACCAAACCAAGTCTCAGGTAGATTCCAATATTACGGGTCGTGGCTATCTTACGAGCAGTTCACTACAACCCTATGCGACAACAACTAGTGTACAGAATTTGGTTAGAACCACCTCTGATAGTTTTACCCAGCGAATCAGTCAAACGGAAAGCAGAATCCCTACCTCAGTTTCGCATCGCAACTTGATAGCTGGTACTTCGGATAGATGGGGTGCTTATCAGACGATAAATGCCAGTAGTAACTGGATAGCCTCTTTAGGAAGAGTTCAGTTTGGAGATGGAAGTGGTATCTATGTTGGGTCAAAAGTGCATTTATATGTTCATATCTCAGCGGATGAGATTACCTTTGACCCTGCTGTAACGACTCGTACTATGAAACTTCAAGGTCCAATCTTGGATAGTCAAAATGTTCGGACATGGACCAACTGGAATTTGTATCACCCTTTCTACAATAAATGGAGCAGCAATCTGACAACAGGTAACAACTATCGCTTGATAAAACTGACTGCCACCGTCACTCAAGAGATGTACCAACACTCTAAAGGTTTTGAACTTCAAGTCAGAATCGATGGAGTTAAAACTGGTAAGTTCCATGTGAGAGCCTTAATGGTTTCAACTGGTGATATCTTTCCAGACTATTGGACACCGTCATTAGACGACTTTACGACAGTAACCGCCTTTCATGAAGTGCGGGATACTGTCAGCAGTCACACTCGAACAATTGGAGATCACACCAATCAAATCAGTCAGGTTGTTCAAACGGCTACTGGGATTGTGACACGAGTTGGCAATCTAGAAACAAGTCGAGCGACAATGGCGGCAGTGAATGCCATTCAAACTCAGGTTTCAACACTTGCTGGGTCGTGGTCGGTTAGAAATCTGACCAGTGCAGGAACAGTATTAAGTCAACTTAATCTCAATAAGGATGGCACAGTCAAGATTGATGGTAAACTCGTCCAAATTACAGGTACTACCTACATCCAAGATGGTGTCATTGCGAGCGGAAAGATTGCAAGTCTTGATGCAGGTAAGATTACGTCAGGCATCATCTCGGCAGCTCGTATTGGAGCAGAAGCAATCACTGCGGATAAGTTAAAGGTTGACCAGGCTTTCTTTACCAAGTTTATGGCAACAGAAGCCTACCTCAAGCAGTTGTTTGCCAAATCGGCCTTTATAACACAAGTGCAGTCAGTAACCCTATCTGCCAACAAAATTTCAGGCGGTATTTTGTCAGCCATCAACGGAGCTATGAAAATCAATCTTTCACTTGGGAACATCAAGTTCTTTACCAACTCTCCATCCATTTCTCGTGAGGTTAGTGGTTATCCTCACCAGTGGGTTTCATTTGAAACAGGTACGTCAAACGGTAAGCCATGTGGTGTAACCATTATCGGTTCCAATCGATGGAACAACTGGAATGCCAATGACGGTGGCTTTGTAGGAATCCGAGCATGGAACGGTACAGATACCGACCAAATTGATGTTGTAGGCGATAAGGTACGTTTAGCTAGTGCCCCATATACCAATCCAGATGGCTGGGAAATAGTAACGTTGCCTAACCGACTGAGTATTGATGCCTATAAAGCTTCTGACCGACCAAGTTCAATTTTGAATATCGGAGATATCCGCATCTATCGAAACGGTACAACATACGTCAGTTTGAAAGATGTTCTTCATCAATTCAACCACAATTTTAAACACTTAGTAAACATCACAGGTCGAGGTGATGTCATCTTGACATGGGATACGATTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab7f8ca230c47191cff68f5d27472a33fbc4d425f0be079183b6bbaafb5c81d8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7253
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50