Protein

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Genbank accession
YP_009876960.1 [GenBank]
Protein name
structural protein with Ig domain
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MPTITVLVAPEVVRNKPETERLHTVTGTALGWEKTSLNQDPDEILTECKGLDALLTQSNLQADGVTKVDPTKPIGFEISYEIHDPSAVLTTGLTITPATAAGEAGQVVELLATVAPANATYQGVNWYSGDITKAVHIGGGKFKLLASGSVTVYGVTIEGGHTDSTVITVAGALALSTDLAASQDVTAGADATFTIAATGGTTPYTYAWYFSDVPGGAGTVIDAGANATAATASLVITAVDAADEGEYWCVVEDADGHSVTSTRCEMAVV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 27522,32910 Da
isoelectric point:4,24152
aromaticity:0,05948
hydropathy:0,16468

Domains

Domains [InterPro]
DC_0400
STR
2–269
DC_0400
G3DSA:2.60.40.1080
STR
86–170
G3DSA:2.60.40.1080 IPR013783
IPR003343
STR
91–160
IPR003343 IPR007110
IPR003599
STR
180–269
IPR003599
IPR036179
RBD
181–262
IPR036179
PF13927
STR
183–252
PF13927
cd00096
STR
191–262
cd00096
YP_009876960.1
1 269
Architecture
STR
STR 2-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EspM4VN
[NCBI] 		2137745 Uroviricota > Caudoviricetes > Pantevenvirales > Aglimvirinae > Agtrevirus
Host Enterobacter asburiae
[NCBI] 		61645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009876960.1 [NCBI]
Genbank nucleotide accession
NC_049384 [NCBI]
CDS location
range 31359 -> 32168
strand -
CDS
ATGCCAACAATCACTGTATTAGTAGCACCGGAAGTTGTTCGCAACAAACCGGAAACCGAGCGTCTGCACACTGTGACGGGCACTGCTCTGGGTTGGGAAAAGACCAGTCTTAACCAAGACCCAGATGAGATCCTGACCGAGTGTAAAGGCCTGGACGCCCTGCTGACTCAGAGCAATCTGCAGGCTGATGGCGTGACCAAAGTTGATCCAACCAAGCCTATCGGCTTCGAGATCTCTTACGAAATCCACGACCCAAGCGCCGTGCTGACCACTGGCCTGACCATTACTCCCGCGACTGCTGCTGGCGAAGCCGGTCAGGTTGTTGAACTGCTGGCGACCGTCGCTCCGGCGAACGCGACCTATCAGGGCGTCAACTGGTACTCTGGCGACATCACCAAAGCAGTACACATCGGTGGTGGTAAATTCAAGCTGCTGGCTTCCGGTTCGGTGACCGTCTATGGCGTAACCATCGAAGGCGGCCACACTGACTCCACCGTCATCACAGTAGCGGGTGCGCTGGCTCTGTCTACTGATCTGGCCGCTTCTCAGGATGTGACAGCAGGCGCTGACGCAACCTTCACCATCGCTGCTACAGGCGGCACAACACCGTACACGTATGCTTGGTACTTCTCTGATGTCCCTGGCGGCGCTGGTACGGTGATTGATGCAGGCGCTAACGCCACTGCAGCTACCGCAAGCCTGGTTATCACGGCAGTTGATGCCGCCGACGAGGGTGAGTACTGGTGTGTAGTTGAAGACGCCGACGGCCACTCTGTGACCTCCACCCGTTGTGAAATGGCTGTGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
675a79474b13ffd2ace9930dc08344b9022066c11857610394831993d2302801
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7229
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Genome Structure of Virulent Phage EspM4VN to Control Enterobacter sp. M4 Isolated From Plant Soft Rot Thanh,N.C., Nagayoshi,Y., Fujino,Y., Iiyama,K., Furuya,N., Hiromasa,Y., Iwamoto,T. and Doi,K. 2020 — GenBank