Protein

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Genbank accession
QFP93660.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQVTIADPVLVNPLEQFKPHVADSTRRALVDLFPPKELDVEVTAVHKEELAEIKLQVYAQCDDEMGRAVKTADWGTHMKPQAMMSVAMMVAGAAAYMDNDSDLYNPRAHSYRLEYANQWLKAYLFTHKMEMPTEHQAIALGTAEAPRNTNGYMDHQINDWARHLGIVAFSQGLIRQLPEVNVALQRLLVSKYDVQWDKYEHFSTPVRAHATELEGRVGCRKYLLGVTYTEDGTAWFAGYLTLDDFFKLRYRRMRLGAAIKEITKSDELARIAADIRELTDYSIVLHPNDRPFGAEYRRIYLENDDMLGSCMTSDAGCYDSPLGVHPCDVYSTAHYGQGDNGLVLVEVRTGSGETSVPVGRGILNIDNGMIVRWYGQYKASVMLRNVYGIRLDSEALDGVNIAVIRDDDHIAAPYLDGIYRVGWGGDTLTIGNRGDIDMDDTSGYQTLEDDTEYGTCRLSGNEYPVDDMVWQDYTGTFYHPDYVNEDDVFLCPVLGEYAPDTDGSYIMVDGEEVLVHDEVDAGCYSRRGWVNLPGIGLTQNADTYTYDEVTERYYDDGAYEDLISEREAEQDAE
Physico‐chemical
properties
protein length:573 AA
molecular weight: 64620,31580 Da
isoelectric point:4,53430
aromaticity:0,10122
hydropathy:-0,41204

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFP93660.1
1 573
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,0025
Central domain 192 452 262 0,9339
C-terminal 453 573 120 0,2588
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-452
C-terminal
453-573

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage CX5-1
[NCBI] 		2652427 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium atrosepticum
[NCBI] 		29471 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFP93660.1 [NCBI]
Genbank nucleotide accession
MN270888 [NCBI]
CDS location
range 36941 -> 38662
strand +
CDS
ATGCAAGTTACTATTGCTGACCCAGTGCTCGTAAACCCACTCGAACAGTTCAAACCACACGTTGCAGATAGTACCCGGCGCGCTCTGGTAGACCTGTTCCCACCTAAAGAGTTGGATGTTGAAGTAACAGCCGTGCATAAGGAAGAACTGGCTGAAATTAAGTTGCAGGTGTACGCTCAGTGTGATGATGAGATGGGACGCGCTGTTAAAACGGCGGATTGGGGTACCCACATGAAACCACAGGCTATGATGTCTGTGGCTATGATGGTAGCGGGCGCGGCGGCTTACATGGACAATGACAGTGACCTGTACAATCCCCGCGCACACTCGTACCGTCTGGAGTATGCGAACCAGTGGCTCAAGGCGTACCTGTTCACACACAAGATGGAGATGCCTACTGAGCACCAAGCCATCGCATTAGGCACTGCCGAAGCACCACGTAACACTAACGGTTACATGGACCACCAGATTAATGATTGGGCACGTCATTTAGGCATAGTTGCTTTCTCGCAGGGTTTGATACGTCAACTACCAGAAGTGAACGTAGCATTACAACGTCTACTGGTCAGTAAGTATGACGTGCAGTGGGATAAGTACGAACATTTTTCTACCCCAGTACGTGCACATGCTACTGAGTTGGAAGGGAGGGTTGGTTGCCGTAAGTATCTACTCGGTGTTACTTATACAGAAGACGGTACTGCATGGTTTGCAGGCTACCTAACGCTTGACGACTTCTTCAAGCTGCGCTACCGCCGTATGCGCTTAGGTGCTGCTATCAAAGAGATCACAAAGTCGGATGAGCTGGCACGTATCGCTGCGGATATCCGCGAACTGACTGACTACAGTATTGTACTGCACCCTAACGACAGACCGTTCGGTGCAGAGTACCGGCGTATCTATCTGGAGAATGACGATATGCTGGGCTCCTGCATGACTAGCGACGCGGGGTGTTACGATTCGCCTTTGGGTGTACACCCATGCGATGTGTACTCAACGGCCCACTACGGGCAGGGTGATAACGGGTTAGTACTGGTTGAGGTTCGTACTGGTTCAGGCGAAACCAGTGTACCAGTGGGGCGCGGTATCTTGAACATTGATAATGGTATGATAGTACGCTGGTACGGGCAGTACAAGGCTAGTGTCATGTTGCGTAATGTGTACGGTATACGGTTGGATAGTGAAGCACTGGATGGTGTAAACATCGCAGTTATACGTGATGATGACCACATAGCTGCACCGTATCTTGACGGTATCTACCGCGTTGGGTGGGGTGGTGATACGTTGACCATCGGTAACAGGGGTGATATTGATATGGATGATACGTCGGGTTATCAGACGCTGGAAGATGACACAGAGTACGGCACATGCCGCCTATCTGGTAATGAATACCCTGTCGATGACATGGTGTGGCAAGACTACACAGGGACGTTCTACCACCCAGATTACGTCAATGAAGATGATGTGTTCCTCTGCCCTGTACTGGGTGAGTACGCCCCTGATACAGACGGTTCGTACATCATGGTGGATGGGGAGGAAGTACTGGTGCATGATGAGGTAGACGCAGGTTGTTACAGCCGTCGTGGGTGGGTGAACTTACCGGGCATTGGCCTGACGCAGAACGCCGATACGTACACGTACGATGAAGTGACAGAACGTTACTACGATGATGGCGCGTACGAAGACTTAATTAGTGAGCGAGAGGCAGAACAAGATGCAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eaec2257e4eebe99709ce006df7eb3d24fbd52f39ba6a3526aaadfe2dd0ed0be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4183
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Six bacteriophages against potato bacterial diseases Zhang,X. and Kering,K. 2022-08-30 — GenBank