Protein

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Genbank accession
YP_004327330.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MADIKLKYLTDLASATGASGDDLMHINQGGNDRSITVTTLTGAIVNSIYPVGITIWFNSSSNPNSLFPGTTWGRLSGAGRTVRIANDNGSDVGQQGGSDSVRLTTGNIPAHNHSFSGSTEAYDHGTVNTANSGAHSHKAGVGAPGAQWEGFITGTDNSGWYSKNYTSTDGDHSHSVPIGAHSHKFSGETSSVGKAEQIDIKNSYTTQAAWTRVS
Physico‐chemical
properties
protein length:214 AA
molecular weight: 22314,81920 Da
isoelectric point:6,16472
aromaticity:0,07477
hydropathy:-0,49346

Domains

Domains [InterPro]
DC_0033
STR
3–214
DC_0033
IPR053827
ATT
44–213
IPR053827
SSF88874
STR
45–182
SSF88874
YP_004327330.1
1 214
Architecture
STR
ATT
STR 3-43 | ATT 44-214
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004327330.1
1 214
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,8354
Central domain 46 203 159 0,0032
C-terminal 204 214 10 0,9955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-203
C-terminal
204-214

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phiEt88
[NCBI] 		925984 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia tasmaniensis
[NCBI] 		338565 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Erwinia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004327330.1 [NCBI]
Genbank nucleotide accession
NC_015295 [NCBI]
CDS location
range 19632 -> 20276
strand +
CDS
ATGGCTGATATAAAATTAAAATATCTGACTGATTTAGCCAGCGCAACAGGGGCGTCAGGCGATGACTTGATGCACATAAATCAGGGCGGTAATGACCGATCAATAACTGTAACCACACTAACCGGGGCTATAGTTAACAGTATTTATCCGGTAGGAATTACTATCTGGTTTAACTCTTCATCTAATCCGAACTCTTTATTTCCGGGTACAACATGGGGGCGCTTATCTGGCGCAGGGAGAACAGTACGGATTGCCAACGACAATGGATCCGACGTTGGCCAGCAGGGCGGCAGCGATAGCGTAAGATTAACGACAGGAAACATCCCAGCACACAACCATTCATTTTCTGGCAGTACAGAAGCATACGACCATGGAACAGTAAATACCGCTAATTCTGGTGCTCATAGCCATAAAGCTGGAGTCGGAGCGCCGGGAGCGCAGTGGGAAGGGTTCATTACGGGGACTGATAACAGCGGCTGGTATTCAAAAAATTATACATCAACGGATGGAGATCATTCTCATTCAGTGCCAATTGGTGCGCACTCGCACAAATTTAGCGGCGAAACATCATCCGTAGGTAAAGCCGAACAAATTGATATTAAAAATTCATATACCACGCAAGCAGCTTGGACAAGGGTCTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06b680c413dc598ac5007570e94ccde2a2029bc9b3ce18b7ea9f975fa47ddffe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7931
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50