Protein

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UniProt accession
G8EY13 [UniProt]
Protein name
Tail collar protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MTQLGLTVGTSTPTTPYNGQLWVDTNTNPPILKVYNGATFTTVSFLPGSSVATSPSGTAPSSPTLGQLWLDTSQTPDELKVYDGAAFVRVDPLGITDADAAAKYLQITNAATTYLALTGGTLTGNLTLTGNPTTTNMASNKGYVDAQIAAIPAVTDQTPAGTVIYSARSTAPTGYIKANGAAISRTTFSVLFAAIGTQFGVGDGSTTFNVPDLRGEFIRGWSDGHTVDSGRTLGSNQGSANLSHNHGIDDPSHAHGIDDPGHNHSLTAARETASAQSGNGDDECRNQDFSTNNNTTGISIISNTTGISIQNDGGSESRPRNVSLLACIKT
Physico‐chemical
properties
protein length:330 AA
molecular weight: 34044,80840 Da
isoelectric point:4,94769
aromaticity:0,06061
hydropathy:-0,27818

Domains

Domains [InterPro]
DC_1413
STR
2–330
DC_1413
IPR037053
ATT
148–214
IPR037053
SSF88874
STR
154–329
SSF88874
IPR011083
ATT
161–218
IPR011083
G8EY13
1 330
Architecture
STR
ATT
STR
STR 2-147 | ATT 148-218 | STR 219-330
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
G8EY13
1 330
Domain Start End Length (AA) Confidence
N-terminal 1 323 323 0,5800
Central domain 324 323 1 0,0122
C-terminal 324 330 6 0,8728
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-323
Central
324-323
C-terminal
324-330

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Uroviricota > Caudoviricetes > Pantevenvirales > Neritesvirus > Neritesvirus scam8
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AET72703.1 [NCBI]
Genbank nucleotide accession
JF974299 [NCBI]
CDS location
range 148331 -> 149323
strand +
CDS
CTGACCCAATTGGGGTTAACGGTTGGAACGTCTACTCCAACGACGCCTTATAACGGCCAACTTTGGGTTGATACCAATACGAACCCTCCGATTCTGAAGGTTTATAACGGTGCAACGTTTACAACTGTCAGTTTTCTACCTGGGTCGTCAGTTGCTACAAGCCCAAGTGGCACTGCGCCTTCGAGTCCAACCTTGGGGCAACTGTGGCTTGATACGTCTCAAACGCCGGATGAACTGAAGGTCTATGACGGTGCAGCTTTTGTTCGTGTTGATCCCTTAGGTATCACTGATGCTGATGCCGCTGCCAAGTATTTGCAGATTACGAATGCTGCAACAACGTATCTGGCGTTAACTGGTGGGACGTTGACGGGAAACCTGACACTGACAGGCAATCCCACAACAACCAATATGGCCAGTAACAAGGGCTATGTTGACGCTCAAATTGCTGCGATTCCGGCAGTAACTGACCAGACGCCTGCTGGAACGGTTATTTATTCGGCTAGGTCTACCGCTCCAACTGGTTACATTAAAGCGAACGGTGCTGCGATTAGTCGAACAACGTTTTCAGTGTTGTTTGCAGCGATTGGAACTCAGTTTGGTGTAGGTGATGGATCTACCACGTTCAACGTGCCTGATTTGCGTGGTGAATTTATCCGTGGTTGGAGTGATGGTCATACGGTTGATAGCGGTCGAACGCTAGGCAGCAACCAAGGAAGTGCAAACCTGTCTCACAATCACGGAATCGACGATCCTAGCCACGCTCACGGAATCGACGATCCTGGGCATAATCACAGTCTTACCGCAGCTCGTGAAACGGCAAGTGCTCAGTCAGGAAACGGAGATGACGAATGCCGAAACCAAGACTTCAGCACAAATAACAACACAACTGGGATTTCAATTATAAGTAACACCACTGGGATCAGCATTCAAAACGATGGCGGCAGCGAGTCACGTCCCAGAAACGTGTCCTTGTTGGCCTGTATCAAGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b47bc211f64789f83a3b8346a7fb387367c2d7935a2622f15b5807ee1156d353
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50